Gene Amir_4383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4383 
Symbol 
ID8328580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5180272 
End bp5181117 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content70% 
IMG OID644944845 
ProductTaurine dioxygenase 
Protein accessionYP_003102078 
Protein GI256378418 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAGCG GCATGACTTT CCAGGTTCGC CCGGTGTCCG GTTCGATCGG TGCGGAGGTG 
TACGGCGTCG ACCTGAGCAC CGTCGACGAC GAGCAGTTCA AGGAGATCCA CGACCTGCTG
GTCCGCCACC TGGTGCTGTT CTTCCCGGAG GCGGGCGGCC TGACCCCGGA GGCGCACCAG
GCGTTCGGCT CCCGGTTCGG GGAGTTGGAG GTGCACCCGT TCCTGCCGAA GCTGGAGGGG
CACGAGCACA TCGTCGTGCT CGATTCCGAC AAGGGCGCGA AGGCCGACGT GTGGCACACC
GACGTGTCCT ACGTGAAGCA CCCGCCGATC ACGTCGGTCC TGCAGATCAC GCTCACCCCC
GAGGCGGGCG GGGACACGAT GTGGAGCAAC CAGTACCTGG CGTACGAGGC GCTGTCCGAG
CCGATGCGGG AGCTGCTGGA GGGCACGACC GCCTCGCACG TGTTCGCGCA CCCGCAGGGC
ACGTTCCGCA GCGAGGTCGA GCACCCGGTG GTGCGGGTGC ACCCGGTGAG CGGGCGCAAG
AGCCTGTACG TGAACCGGAT GTTCACCAAG CGCATCCTGC AGCTGAGCCG GGGCGAGAGC
GCGGCGCTGC TGGAGCACCT GTTCGAGGTG TCGGAGAGCC CGCAGCGCAC CTGCCGGTAC
CGCTGGGCGC CGGGCGCGGT GGCGATGTGG GACAACCGGG CCACCCAGCA CTACGCGGTC
AACGACTACA CCGGGCGGCG GGTCGGGCAG CGGGTGACGG TCATGGGCGA CGACCCGCGC
GGCGCAGAGC CGCGCTGGCC GCACTTCCAG GAGGGCGCGA TGGCGGCGAC GGTGGTGAAG
GACTGA
 
Protein sequence
MRSGMTFQVR PVSGSIGAEV YGVDLSTVDD EQFKEIHDLL VRHLVLFFPE AGGLTPEAHQ 
AFGSRFGELE VHPFLPKLEG HEHIVVLDSD KGAKADVWHT DVSYVKHPPI TSVLQITLTP
EAGGDTMWSN QYLAYEALSE PMRELLEGTT ASHVFAHPQG TFRSEVEHPV VRVHPVSGRK
SLYVNRMFTK RILQLSRGES AALLEHLFEV SESPQRTCRY RWAPGAVAMW DNRATQHYAV
NDYTGRRVGQ RVTVMGDDPR GAEPRWPHFQ EGAMAATVVK D