Gene Amir_4373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4373 
Symbol 
ID8328570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5166988 
End bp5167677 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content73% 
IMG OID644944835 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102068 
Protein GI256378408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.335963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACCCG TACTGTCCGC TCCCATGGGG CCCGACGAAT CCCGCTCGCT GCTGGAGGTC 
GCGTTCACCG CCGCCGCGAC GGGCGCCGAA CCCGCCGAGC CGGAGGACGA CGAGATCACC 
ACCCGGCTGC TCGACGCCGC GCACGACCAG TTCTGCCGCA TGGGCGTCAA GCGCTCCACC 
ATGGCGGACG TGGCGAAGCT GGCCGGGCTG TCCCGGATCA CCCTCTACCG CCGCTTCGCC 
ACCAAGGACG TGCTGTTCGA GCAGGTCGTG CGGCGCGAGT TCCGGCGCTA CTTCGACCGG 
TTCGCCGCCG ACGTGAGCAA GGCCGAGACC GTGCAGGACC GGGTCGTGGA GGGCTTCGCC 
AGCTCGCTGC GCGCGATCCG GGAGAACCCG CTCATCGGCG GCCTGATGTC CACCGAGCCG 
GACGCGGTCC TGCCGTCCAT GGTCTTCGAC GGCGGGCGGA CGCTGGCCGT GGTGCGGCAG 
TTCGTCGCCG GGCAGCTGCG CGCCGAGCAG CACGCGGGCA CGGTCGCCGC CGAGGTCGAC 
GCCGACCTGG TCGCGGAGAT GATGGTCCGC GCCTGCGCGT CGTTCCTGGC GATCCCGAGC 
TTCGTGGTGG ACCTGGACGA CGAGGCGCAG GTGCGCGCGG TGGCCCGGCG GTTCCTGGTG 
CCGATGCTCG AACCCCCGCG CGCGCCCTGA
 
Protein sequence
MEPVLSAPMG PDESRSLLEV AFTAAATGAE PAEPEDDEIT TRLLDAAHDQ FCRMGVKRST 
MADVAKLAGL SRITLYRRFA TKDVLFEQVV RREFRRYFDR FAADVSKAET VQDRVVEGFA 
SSLRAIRENP LIGGLMSTEP DAVLPSMVFD GGRTLAVVRQ FVAGQLRAEQ HAGTVAAEVD 
ADLVAEMMVR ACASFLAIPS FVVDLDDEAQ VRAVARRFLV PMLEPPRAP