| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4372 |
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| Symbol | |
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| ID | 8328569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5164804 |
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| End bp | 5166969 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644944834 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_003102067 |
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| Protein GI | 256378407 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGAGC AGGACATGAT CGGGTGGGAG CAGGGCGAGG ACGGCGTCGT CGTGCTGACG
ATGGACGACC CGGACCACCC GGTCAACACG ATGAACCCGG CCTACCGGAC GTCGATGGAG
GCCGTCGTCA CGCGGCTGGA GGCCGAGCGC GACAGCATCA CCGGCGTGGT GCTGACCTCG
GCGAAGAAGA GCTTCTTCGC GGGCGGTGAC GTCGGGTTCA TGAGCAGGGC CGAGCCCGAG
GACGCCGAGG CGCTCACCGA GGTGTGCGCG GTGCTCAAGG CGCAGCTGCG GATGCTGGAG
ACGCTGGGCA GGCCGGTGGT GGCGGCGGTG AACGGGTCGG CGCTGGGCGG CGGCCTGGAG
ATCGCGCTGG CCTGCCACCA CCGGATCGCG CTCGACGTGC CGGACAGCCG CATCGGGCTG
CCGGAGGTGA CGCTGGGGCT GCTGCCGGGG TGCGGCGGGG TCAGCCGGAC GGTGCGGCTG
CTGGGGTTGC AGAAGGCGCT CACGCAGGTG TTGTTGCAGG GCCAGCGGTA CAAGCCCGCG
CAGGCCCTGG AGCTGGGCCT GGTGGACGAG CTGGCGTCCA GCCGCGAGGA GCTGCTGGCC
AAGGCGCGCG CGTGGGTGCT GGCCAACCCG GACGCGGTGC AGCCGTGGGA CGCCGACGGC
TACCGGATGC CCGGCGGGGC GCCGTCGAGC CCGAAGGTCG CGGCGCTGCT GCCCGCGTTC
GCGGCGAACC TGCGCAAGCA GGTCAAGGGC GCTCCCCTGC CCGCGCCGCG CAACATCCTG
GCGGCGGCGG TGGAGAGCGC GCAGCTGGAC TTCGAGTCCG GGCAGCGGGT GGAAACCGCT
TACCTGGTCG AGCTGATGAT CGGCCAGGTC TCGAAGAACA TGATGCGGGC GTTCTTCTAC
GACACGCAGC ACGTCAACTC CGGAGGCAAC CGGCCGGAGG GCTTCCCGCC GCACGTCGCG
CGTAGGGTCG CGGTGCTGGG CGCGGGCATG ATGGGCGCGG GCATCGCCTA CTCCTGCGCG
CGGGGCGGGC TGGAGGTCGT GCTCAAGGAC GTCACGGCGG AAGCGGCCGA GCGCGGCAAG
GGCTACTCCG CGAAGCTGGT GGACAAAGCC GTGGCGCGCG GGAAGTCCAG CCGGGAGCGC
GGGGACGAGC TGCTGGCGCG CATCACCCCG ACCGCCGACG TGGCGGACCT GGCCGGGTGC
GACCTGGTGA TCGAGGCGGT GTTCGAGGAC CAGGGCCTCA AGCACAAGGT GCTCGCCGAG
GTCGAGGGCG TGGTCGCGGC GGACGCGGTG CTCGGGTCCA ACACCTCCAC GCTGCCGATC
ACCGGTCTGG CCGAGGGGGT GACCCGGCAG GAGGACTTCA TCGGGCTGCA CTTCTTCTCG
CCGGTGGACA AGATGCCGCT GCTGGAGATC GTGGTCGGCG AGCGGACGAG CGAGCACACC
GTGGCCAAGG CGGTGGACAT CGCCCGGCAG ATCGGCAAGA CGCCGATCGT GGTCAACGAC
AGCCGGGGGT TCTTCACCAG CCGGGTCATC GGGCGGTTCG TGGACGAGGC CGTGGCGATG
GTCGGCGAGG GCGTCGACCC GGTCACCGTC GAGCAGGCCG GGTCGCAGGC CGGGTACCCG
GCCCCGCCGC TGCGGTTGAT GGACGAGCTG ACGCTGACCC TGCCGCGCAA GATCCGGCAG
GAGACCAAGG CGGCGGCGCT GGCGGCCGGC GCCGAGTGGG TCGAGCACGG CGCGGAGGCC
GTGGTGGACC GGATGATCGA CGAGTTCGGG CGCGGCGGGC GGTCCAGCGG GGCCGGGTTC
TACGAGTACG CGGACGGCAA GCGGGTCGGG CTGTGGCCGG GGCTGCGGGA GCACTTCACC
CGCGGGGGCC TGGAGATCCC GTTCCTGGAC GTGCAGGAGC GGATGCTGTT CGCCGAGTCG
CTGGACGCCA TCCGCTGCCT GGACGAGGGC GTGCTGCGGT CGGTGCCGGA CGCGAACGTC
GGGTCGGTGC TGGGCATCGG GTTCCCGGCG TGGACCGGCG GGGTGCTCCA GTACGCCAAC
GGCTACCCCG GTGGGCTGAG CGGGTTCGTG GCGCGGGCTC GGGAGCTGGC GGCGGCGTAC
GGCGAGCGGT TCAGCCCGCC GGAGTCGTTG GTGGGCAAGG CTGAGCGCGG CGAGCGGTAC
GAGTAG
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| Protein sequence | MREQDMIGWE QGEDGVVVLT MDDPDHPVNT MNPAYRTSME AVVTRLEAER DSITGVVLTS
AKKSFFAGGD VGFMSRAEPE DAEALTEVCA VLKAQLRMLE TLGRPVVAAV NGSALGGGLE
IALACHHRIA LDVPDSRIGL PEVTLGLLPG CGGVSRTVRL LGLQKALTQV LLQGQRYKPA
QALELGLVDE LASSREELLA KARAWVLANP DAVQPWDADG YRMPGGAPSS PKVAALLPAF
AANLRKQVKG APLPAPRNIL AAAVESAQLD FESGQRVETA YLVELMIGQV SKNMMRAFFY
DTQHVNSGGN RPEGFPPHVA RRVAVLGAGM MGAGIAYSCA RGGLEVVLKD VTAEAAERGK
GYSAKLVDKA VARGKSSRER GDELLARITP TADVADLAGC DLVIEAVFED QGLKHKVLAE
VEGVVAADAV LGSNTSTLPI TGLAEGVTRQ EDFIGLHFFS PVDKMPLLEI VVGERTSEHT
VAKAVDIARQ IGKTPIVVND SRGFFTSRVI GRFVDEAVAM VGEGVDPVTV EQAGSQAGYP
APPLRLMDEL TLTLPRKIRQ ETKAAALAAG AEWVEHGAEA VVDRMIDEFG RGGRSSGAGF
YEYADGKRVG LWPGLREHFT RGGLEIPFLD VQERMLFAES LDAIRCLDEG VLRSVPDANV
GSVLGIGFPA WTGGVLQYAN GYPGGLSGFV ARARELAAAY GERFSPPESL VGKAERGERY
E
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