Gene Amir_4371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4371 
Symbol 
ID8328568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5163548 
End bp5164756 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content74% 
IMG OID644944833 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003102066 
Protein GI256378406 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAGG CATTCATCTA CGACGCGATC CGCACCCCGA GGGGCAAGGG TCGCGGTGGC 
GCGCTGCACC ACGTCAAACC GGTGTCGCTG GTGGCCGGGC TGATCCGGGA GGTCGGCGCC
AGGCACCCCG GCCTCGATCC CGCCCGGATC GACGACGTCG TGCTCGGCGT GGTCACCCCG
GTCGGCGACC AGGGCATGAA CCTGGGCAAG ACCGCCGCGC TCGTGGCCGG GCTGCCCGAC
GAGGTCGCCG GGTTCCAGCT CAACCGGTAC TGCGCCTCGG GGCTGGAGGC GGTGAACCTG
GCCGCGCAGA AGGTCAGGGG CGGCTGGGAG CAGCTGGTGC TGGCCGGTGG CGTGGAGTCG
ATGTCGCGGG TGCCGATGGG CGCCGACGGC GGGCCGATGG CCACCGACCC GGACACCGCC
TACGCGATCC CGTTCGTGCC GCAGGGGGTC AGCGCCGACC TGATCGCGAC CATCGAGGGC
TTCTCGCGCA CCGACGTCGA CGAGTACGCG CTGCGCTCGC AGCGGCTCGC GGCGGCGGCG
TGGAGCGGCG GGTACTTCAC CAAGTCCGTG GCGCCGGTCA AGGACCGCAA CGGGGTCACC
GTGCTGGCCG AGGACGAGCA CCCCCGGCCG TCCACGACGC CGGAGGCGCT GGCCGGGCTG
AAGCCCTCGT TCGCCGCGCT CGGCGAGGCG GGCGGGTTCG ACGCGGTGGC GCTGCAGAAG
TACCACCGGG TCGAGCGGAT CGAGCACGTG CACACGCCGG GCAACTCCTC CGGAGTGGTG
GACGGCGCGG CGCTGGTGCT GGTCGGCTCC GAGCGGGCCG GGCGCGAGCT GGGGCTGACC
CCGCGCGCCC GCGTGGTGGC CGCCGCCGTG AGCGGGGCCG ATCCGACGAT CATGCTGACC
GGTCCGGCGC CCGCGACGCG GAAGGCCTTG GCGCTGGCGG GTCTGACCGT GGACGACATC
GACCTGTTCG AGATCAACGA GGCGTTCGCG GCGGTGGTGC TGCGCTACGT GAAGGACCTG
GACCTGCCGT GGGACAAGGT CAACGTCAAC GGCGGCGCGA TCGCCATGGG GCACCCGCTG
GGCGCGACCG GGGCGATGCT CGTGGGCGCC GTCGTGGACG AGCTGGAGCG GCGCGACGCG
CGGCGGGCCG TGGTGACCCT GTGCGCGGGT GGCGGCATCG GCATCGCCAC CGTGATCGAG
CGCGTGTGA
 
Protein sequence
MSEAFIYDAI RTPRGKGRGG ALHHVKPVSL VAGLIREVGA RHPGLDPARI DDVVLGVVTP 
VGDQGMNLGK TAALVAGLPD EVAGFQLNRY CASGLEAVNL AAQKVRGGWE QLVLAGGVES
MSRVPMGADG GPMATDPDTA YAIPFVPQGV SADLIATIEG FSRTDVDEYA LRSQRLAAAA
WSGGYFTKSV APVKDRNGVT VLAEDEHPRP STTPEALAGL KPSFAALGEA GGFDAVALQK
YHRVERIEHV HTPGNSSGVV DGAALVLVGS ERAGRELGLT PRARVVAAAV SGADPTIMLT
GPAPATRKAL ALAGLTVDDI DLFEINEAFA AVVLRYVKDL DLPWDKVNVN GGAIAMGHPL
GATGAMLVGA VVDELERRDA RRAVVTLCAG GGIGIATVIE RV