| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4354 |
|---|
| Symbol | |
|---|
| ID | 8328551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5125504 |
|---|
| End bp | 5127054 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644944818 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003102051 |
|---|
| Protein GI | 256378391 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCACG AGTACCTGAT CATCGGCGCG GGCCCGGCGG GCCTGCAGCT GGCGGCACTG
CTGGAGCGGG ACGGCCGCGA CTACGCGGTG CTGGAGCGCG GCGACGCGCC GGGGGCGTTC
TTCGCCCGCT ACCCCAGGCA CCGCACCCTG ATCTCCATCA ACAAGGTGCG CAGCGGGTAC
CGGGACCCGG AGCAGCGGCT GCGGATGGAC TGGAACTCGC TGCTGTCCGA CGACCCCGAG
CTGCTGTTCG GCCGGTACAC CGGCAAGTAC TTCCCGCACG CCGACGACAT GGTGCGCTAC
CTGGCCGACT TCGCCGCCGC CACGGGGGTT CGGGCGCACT ACGGGGTGGA GGTCGTGCGG
ATCTCCCGCG ACGACACCGG TTTCACCGTG GTCGACGGCG CGGGCGAGGA GTGGCGGGCG
GCGCGCGTGG TGGTGGCGAC CGGGGTGTCG AAGCCGAACG TGCCGAAGAT CCGGGGGATC
GAGCACGCCG AGCGCTACGA CGAGTTCGAC CCCTCCCCCG AGTCGTTCAC CGACCAGCGG
GTGCTGATCA TCGGCAAGGG CAACTCGGCG TTCGAGACGG CCGACTCGCT GATCGAGCAC
GCGGCGGTGA TCCACGTCGC CGGGCCGCGC TCGGTGAAGC TGGCCTGGCA GACGCACTTC
GTCGGGCACC TGCGGGCGGT GAACAACAAC TTCCTGGACA CCTACCAGCT CAAGTCGGAG
AACGCGGTGC TGGACGGGAC GATCGAGCTG ATCGAGCCCC GGCCGGGCGG CGGGTTCCGG
GTGCTGTTCC GGTACGCGCG CACGGAGGAG AAGCTGCGGG AGCTGGAGTA CGACCGGATC
GTCTCGTGCG CCGGCTTCCG GTTCGACGCC TCGGTGTTCG ACGGGTCCTG CCGTCCCGCG
CTGGTGATCG ACGACCGGTT CCCGGAGCAG ACCTCGGCCT ACGAGTCGGT GAACGTGCCC
GGCCTGCACT TCGCCGGGAC GTTGACGCAG CAGCGCGACT TCAAGCGGTC CACCAGCGGC
TTCATCCACG GGTTCCGGTA CGGGGCGCGG GCGCTGCACC GGATCCTGAC CGCGCGGCAC
CACGACCGGC CGTGGCCGTC GACCGAACTG GCGGCGACGC CGGAGGCGAT CAGCGACGCG
CTGGTGGCGC GGGTGAACCG CTCCTCCGCG CTGTGGCAGC AGTTCGGGGT GCTGGGCGAC
GTGGTGACGG TGTCCGGTGA TCGGGCCCGG TACGAGGAGG AGGTGCCGAC CGCGCACGTG
GCCGACGGCG GCCTCGGGCC CGCGCCGCAC CGGTTCGTGA TCACCCTGGA GTACGGGCCG
AACCACGACA CCGTCGACCC GTTCGACATC ACGGTGCCGC GCGTGCTGGA GAACGACGTC
GAGCACGCGC AGGACGCCAG CTACCTGCAC CCGGTGGTGC GGCACTACGA GGACGGGGAG
CTGGCCGGCG TGCACCACCT GGCGGAGAAC CTGGAGAACC AGTGGAACCT GCCGCAGGTG
CACCAGCAGC CGCTGGCGGT GTTCGTGAAG GAGTGCCTGG CCGATGGGTG A
|
|---|
| Protein sequence | MAHEYLIIGA GPAGLQLAAL LERDGRDYAV LERGDAPGAF FARYPRHRTL ISINKVRSGY
RDPEQRLRMD WNSLLSDDPE LLFGRYTGKY FPHADDMVRY LADFAAATGV RAHYGVEVVR
ISRDDTGFTV VDGAGEEWRA ARVVVATGVS KPNVPKIRGI EHAERYDEFD PSPESFTDQR
VLIIGKGNSA FETADSLIEH AAVIHVAGPR SVKLAWQTHF VGHLRAVNNN FLDTYQLKSE
NAVLDGTIEL IEPRPGGGFR VLFRYARTEE KLRELEYDRI VSCAGFRFDA SVFDGSCRPA
LVIDDRFPEQ TSAYESVNVP GLHFAGTLTQ QRDFKRSTSG FIHGFRYGAR ALHRILTARH
HDRPWPSTEL AATPEAISDA LVARVNRSSA LWQQFGVLGD VVTVSGDRAR YEEEVPTAHV
ADGGLGPAPH RFVITLEYGP NHDTVDPFDI TVPRVLENDV EHAQDASYLH PVVRHYEDGE
LAGVHHLAEN LENQWNLPQV HQQPLAVFVK ECLADG
|
|---|
| |