Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4345 |
Symbol | |
ID | 8328542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5112684 |
End bp | 5113904 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644944809 |
Product | drug resistance transporter, Bcr/CflA subfamily |
Protein accession | YP_003102042 |
Protein GI | 256378382 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.809262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCATAA CCTCCCCCGA CCGCACAGCC ACGCCGACCC CCGCCCTCAG CCGGGGCCGC CGCGCCTGGC TGGCCCTCGT GCTCGGCTCG CTCAGCGCCT TCGGCCCGCT CACGATCGAC ATGTACCTCC CCGCCATGCC CGACATGGCC CGCGAGCTGG CCACCAGCGC CTCCGCCGTC CAGCTCACCC TCACCGTCTT CGTGATCGGC CTCGCGGTCG GCCAGGTCCT GGTCGGCCCG GTCTCCGACG CGTGGGGCCG TCGCCGTCCG CTGCTCGCGG GCCTCGCGCT CTACGCGGCA GGCTCCCTGC TCTGCGCGCT GGCCCCGGAC ATCACCTGGC TGCTGACCGG CCGCGTCGTG CAGTCCCTCG GCGCCGCGGC GGGCGTGGTG CTGTCACGGG CGATCGTGCG CGACCTGTTC GACGGCGTCG CGATGACCCG CTTCTTCTCC ACCCTCATGC TGGTCAACGG CGTCGCCCCG ATCGTCGCCC CGGTGATCGG CGGGCAGCTT CTCGTCGTCG CGCGCTGGCA GGCCGTCTTC CACGTCCTGA CCGGCCTCGG CGTGCTGCTG CTCGTGGCCG TCCTGCTCGC CCTCCCCGAG TCGCTGCCCG CCGAGCGCCG CAACGCCCGC CCGCGCGACA CCCTGCGCAG CCTCGGCGCG CTGATCGCCG ACTGGAGCTA CCTGCGCCAC GTGCTCGCGG CGGCACTGGT GTTCGCCGCG GTGTTCGCCT ACATCTCCGG CTCCTCGTTC GTGCTCCAGG ACGGCTACGG GCTCAGCGCG CAGCAGTACA GCCTCGTCTT CGGCCTCAAC GGGGTCGGGA CCGTGCTCCT GGGCGCGGGC AACGGGCTCG TCGTCGGCAA GCTGGCCTCC GAGCGGACCC TGCTGCTCGC CGGGACCGCC GTGACCGCCG TCGCCGCGCT CGGCGCGCTG GTCGGCGCGC TCGCCGGGTG GCCGCTGCCG TGGCTGCTGG TGTGCCTGTT CCTGGTCGTG GCGATGATGG GCGTGGTGCT GGCCAACGCG ACCTCCCTCG CCCTCGCCGG GCACGGGTCG GCGGCGGGCG CGGCGTCCTC GCTGCAGGGG CTGCTCCAGT TCCTCGTCGC CGGGATCGCG GCCTCCGCGA TGAGCTGGGG CGGTCAGGCG ACGGCGGTGT CGATGGGCGC GACGATGGTG GCTTGCTCGG TCGGCGCGCT GGCGCTGCTG GTGGTCCGCC GCAGCGCCTG A
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Protein sequence | MSITSPDRTA TPTPALSRGR RAWLALVLGS LSAFGPLTID MYLPAMPDMA RELATSASAV QLTLTVFVIG LAVGQVLVGP VSDAWGRRRP LLAGLALYAA GSLLCALAPD ITWLLTGRVV QSLGAAAGVV LSRAIVRDLF DGVAMTRFFS TLMLVNGVAP IVAPVIGGQL LVVARWQAVF HVLTGLGVLL LVAVLLALPE SLPAERRNAR PRDTLRSLGA LIADWSYLRH VLAAALVFAA VFAYISGSSF VLQDGYGLSA QQYSLVFGLN GVGTVLLGAG NGLVVGKLAS ERTLLLAGTA VTAVAALGAL VGALAGWPLP WLLVCLFLVV AMMGVVLANA TSLALAGHGS AAGAASSLQG LLQFLVAGIA ASAMSWGGQA TAVSMGATMV ACSVGALALL VVRRSA
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