Gene Amir_4338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4338 
Symbol 
ID8328535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5104555 
End bp5105250 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content77% 
IMG OID644944802 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102035 
Protein GI256378375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCGACC TGCTTGAGAC CCCCTCGCCC AAGGCGGCCC GAATCCTGGC CGCCGCGGGC 
GAGCTGCTGC TCGCCCGAGG TGTCCGGGGC GTCACCATCG CCGAGGTCGC CCAGCGCGCC 
CACGTCGGCA AGGGCACCGC CTACCTGTAC TGGAAGACCA AGGAGGACCT GGTCCTCGAA 
CTGGTCTGCC GCGACTTCCT CGCCCTCTCC GGCGAGGTGA CCGCGCGGCT CGCCGCCGAC 
CCCGGCCTGG TCCGCCCCTC CCGGCTGTGC GGGCACATCG TCGCCACCGC CCCGGCGCAC 
CCGTTCGTCA GCGCCGTCAA GGCCGGTGGC GGCGAGCTGC TGGGACCGCT CGCGGCCGAC 
CCGCGCGCGG CCGAGCTGCT CGACCTGCTC GGCCCCGACG CGGTGATGCG GCGCGTCCTG 
CCGATCTGGC GCGCCCACGA CCTGGCCCGC GACGACTGGC CGCTGCCCGA CCAGGCGTTC 
GCGCTCCAGG CCCTGCTCAC CGGCTTCCTG CTGTGCCCGG CCCCCGCCGA CCTCGACCCG 
GCCGCCGTGC TGCCCGCCGC CGTGACCGCG CTGCTCGGCC CGGAGCGGGC CGCCGAGGAG 
CAGGTCCGGT CCGCCGCGGA GGCGGGAGCC CTGGTCATCG CGCGGGAGCA GGCCGCCGCG 
CGGGCGCTCG TCGGCCTCCC GGCCACCACC GGTTGA
 
Protein sequence
MSDLLETPSP KAARILAAAG ELLLARGVRG VTIAEVAQRA HVGKGTAYLY WKTKEDLVLE 
LVCRDFLALS GEVTARLAAD PGLVRPSRLC GHIVATAPAH PFVSAVKAGG GELLGPLAAD 
PRAAELLDLL GPDAVMRRVL PIWRAHDLAR DDWPLPDQAF ALQALLTGFL LCPAPADLDP 
AAVLPAAVTA LLGPERAAEE QVRSAAEAGA LVIAREQAAA RALVGLPATT G