| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4333 |
|---|
| Symbol | |
|---|
| ID | 8328530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5099183 |
|---|
| End bp | 5100976 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644944798 |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
|---|
| Protein accession | YP_003102031 |
|---|
| Protein GI | 256378371 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3573] Predicted oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCGG ACCCGAGCAG CTTGACCAGG CGGGCACTGC TGGCGGCCGG TGGCGGGGCC
GCCGCCGGAT CGGCGTTGGG AGCGCTGGGT TTCGCGGAAG CCGCCGCCGC GCCCTCCGCG
AGCGCGGACG CCGACGCGAT CGTCGTCGGC GGTGGGCTCG CCGGCCTCGT GGCGACCTCG
GAGCTCGTGG CGGCGGGCCG GAAGGTGCTG CTGCTGGACC AGGAGCCGGA GGCGAGCCTG
GGCGGGCAGG CGTTCTGGTC GCTGGGCGGG CTGTTCTTCG TCGACTCGAC CGAGCAGCGC
CTGGCGGGCA TCAAGGACTC GCTGGACCTG GCCCGCGCGG ACTGGTTCAA CACGGCCGGT
TTCGACCGGG GTGTGAACGA CCCGCTGGGC GAGGACCACT GGGCGGCCAA GTGGGCGAAC
GCGTACCTGG AGTTCGCCTC CGGGGAGAAG CGGTCGTGGC TGGCCGGCCT TGGCGTGACG
TGGGTGCCGA TCGTCGGCTG GGCCGAGCGC GGCGGGCAGC TCGCGGACGG GCCCGGCAAC
TCGGTGCCGC GCTTCCACAT CACCCTCGGC ACCGGCCCCG GCGTGATGGA GCCGTTCGAG
AAGCTGGTGC GCCAGGGCGC CGAGCGCGGG CGGGTGCTCT TCCGGTTCCG GCACCGGGTC
GACGCGCTGG TCACCACGAA CGGCGCGGTC ACCGGGGTGC GCGGGGCCGT GCTGGAGGCG
AGTGGCGCCG CGCGCGGGAC TCCCAGCTCC CGCAAGCAGG TCGGGGACTT CGAGCTGCGC
GCGCCGGTCG TGATCGTCAC CTCCGGCGGC ATCGGCGGCA ACCTGGACCT GGTGCGCGCC
AACTGGCCCG CGCGCCTGGG GACGCCGCCC GCGCGGATGG TCACCGGCGT GCCCGCGCAC
GTGGACGGGC GGATGCTCGC CATCAGCCAG TCGGCCGGGG CGCGGCTGGT CAACCGGGAC
CGGATGTGGC ACTACACCGA GGGGTTGGCC AACCACTCCC CCATCTGGCC CGGCCACGGC
ATCCGGGTGC TGGCCGCGCC GTCGTCGCTG TGGCTGGACG GCGACGGCCG CCGGTTCCCC
CTGCCGGGCG TGCCCAGCTA CGACACGCTC GGCACGCTGG AGCTGATCGC GCGGTCCGGG
CACGACCACT CGTGGTTCGT GCTGAACAAG CGGATCATCG ACAAGGAGTT CGTGCTGTCC
GGGTCGGAGC AGAACCCGGA GCTGACCCGC AAGGACCTGC TCGGGTACCT GGCGAGCAGG
TTGCTGGGCA GCACGCCGCA GCCGGTGAAG GCGTTCATGG ACCGGGGCGC GGACTTCGTG
GTCGCGAGCT CACTGTCGGA CCTGGTGGCC GGGATGAACC GGCTGACCGG GTCGAACCGG
GTGCGGCTGG AGGACCTGAA GGCGCAGATC GAGGTGCGGG ACCGGCAGGT GGACAACCCG
TTCACCAAGG ACAACCAGGT GATGGGCATC AGGAACTCGC TGGCGTACGT GGGCGACAGC
CTGGCCAGGA CCGCGCCGCT GCACAAGATC CTGGACCCGG CCGCCGGGCC GCTGATCGCG
ATCCGGATGA ACATCCTCAC GCGCAAGACC CTGGGCGGGT TGCAGACGGA CCTGTCCGGG
CGGGTGCTCG GCGCGAACGG GCAGCCGGTG CGCGGGCTGT ACGCGGCGGG CGAGGTCGCC
GGGTTCGGCG GCGGCGGGGT GCACGGCTAC CGGGCGCTGG AGGGCACCTT CCTGGGCGGG
TGCCTGTTCT CCGGGCGGCA GGCCGGGCGG GCCGCCGCGG CGGCGACCGC CTGA
|
|---|
| Protein sequence | MRPDPSSLTR RALLAAGGGA AAGSALGALG FAEAAAAPSA SADADAIVVG GGLAGLVATS
ELVAAGRKVL LLDQEPEASL GGQAFWSLGG LFFVDSTEQR LAGIKDSLDL ARADWFNTAG
FDRGVNDPLG EDHWAAKWAN AYLEFASGEK RSWLAGLGVT WVPIVGWAER GGQLADGPGN
SVPRFHITLG TGPGVMEPFE KLVRQGAERG RVLFRFRHRV DALVTTNGAV TGVRGAVLEA
SGAARGTPSS RKQVGDFELR APVVIVTSGG IGGNLDLVRA NWPARLGTPP ARMVTGVPAH
VDGRMLAISQ SAGARLVNRD RMWHYTEGLA NHSPIWPGHG IRVLAAPSSL WLDGDGRRFP
LPGVPSYDTL GTLELIARSG HDHSWFVLNK RIIDKEFVLS GSEQNPELTR KDLLGYLASR
LLGSTPQPVK AFMDRGADFV VASSLSDLVA GMNRLTGSNR VRLEDLKAQI EVRDRQVDNP
FTKDNQVMGI RNSLAYVGDS LARTAPLHKI LDPAAGPLIA IRMNILTRKT LGGLQTDLSG
RVLGANGQPV RGLYAAGEVA GFGGGGVHGY RALEGTFLGG CLFSGRQAGR AAAAATA
|
|---|
| |