| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4309 |
|---|
| Symbol | |
|---|
| ID | 8328506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5071806 |
|---|
| End bp | 5074973 |
|---|
| Gene Length | 3168 bp |
|---|
| Protein Length | 1055 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644944775 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003102008 |
|---|
| Protein GI | 256378348 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGGC GAGTGTCCTC GGAGGACGCC TACGTGATGG GCGGGGCGCA GGCGCGGCAG
GTCCTGCCGC GCCGGGGTGA CGGGCGTGAG GGGCGCGCCC TGACGCCCGA CGCCGCCGAG
CGGGTGCGCG GGCTGATCGC CGCCGCGCGC GAGTCGCTCG CCGAGGACGG GCGCGGCGGC
GCGCTCGCGA ACGCCCTGGA GGAGCACCTC GCCGCCCCCG GACCGGTCAG CGCCGGGATC
GTCCACCGGA TCGTGGAGCA CGCCTCGGGG ACGTGGCAGG CGGAGGAGAC CGCCTGCTTC
GTGGACGCGT GGGTCGCCGA GCACGGGGTG GTGTTCGCCG CCGAGGCGGC GCTCTGCTCC
GCGCTGCACC GGATCGACCG CGACGGGGCG CTGACCGGCC GGTTCGACAC CGAGGCCGTC
GAGTGGAGCT GGGCGGGGCA CCGGCCGCTC GCCCGCGTGC GGCACGCGCT GGCCGCCGCG
TCGGACGCCG AGCACGCGGC GGCGGTCGAG CGGGTGGCCG CGCACCGGGG CACGCTCAGG
GGCCGCACCC TGGCCGCGTT CCTGCTGCCC ACCGAGACCG GCTGGGTCGG GCCGCTGTTC
GAGGAGCTGG CGGGGCTCAG GTCCGCGTTC ATCACGCCCT GGTTGTTCCT GGGCTCGGTC
GGCGACCGGG AGTGGTTGGA GGCGCTGGTG GACCGCTGCC CCGTCGAGGG GGTGACGGCG
CCGTCCTGGG TGCTGCCGAC CCTGGTCGAC GCGGTGGGGC CGGAGGGCGT GCTGCCCACG
CTCGTGCGGT GGCTGCCCCG GCTGCCCGCG GCGGCCCGCA AGCGGGTGCT CGGGCTGGTC
GCGGAGTTCC CGCTGGACGA GGCGTTCGCG GTGCTGGCCG GGCAGGGTCC GCCGGGTGTG
AAACCGTTGC GGGACGCGGT GAAGCGCTTC CCCGAGCGCG CCGCGAGGTT GGCGCCGGCG
GAGCTGCTGC CCGCGCCCGC CGACCCGCTG CCGGAGGCGC GTGCCGACGA GCCGGTGCGG
TTGCCGCGCC CGCTGGTCGA CCCGCCGTGG GAGGTCGCCC CGGTGGTCGA GCGGGTGGTG
GTGCCGGGGT TGACGCCGAT CGACCGGCCC GGCGTGGTGT GGCGGCCGGG TGAGCGCGAG
GAGTGGCTGG AGCGGGAGCT GTTCTCCTTG CTCACCGACC CGACCGCGCC CGCCGACTGG
TCGCGGGCGC TCGACGAGGT GGCGCGCGCG AACGACGGTC AGGCCGGGCA CCCGGTGCTG
CTGCTCGCGC CCGAGGAGCC TGCCCGGCGG GTGGTCGTGG CGTGGCGGCC GGAGAACGCG
GGCGGCTTCT GGGCCTGGGG ACCGCGGCTG GTCGCCCGGT TCGGGGTGGA CGCGGCGGGT
GTAGTCGCGC ACGTCGGGGC GACCCGGCGG GACCGCGCGG TCGAGGTGGC GGCCCCGCTG
GTGAGCGCGG CGATCGCGAC CCTGTTCGCC GAGTGGGGCG ACCGGCTCAA GTCCATGCGC
GGCCCGGCGG CGGCCTACTT CGCCCGGCAC GGCGTGGAGG CGGCGCGCCC GCTGGTCCCG
GCCGCGCTGG GGACGCGGGA GGGCCCGCGC CGGGCCGCCG AGCGGGCGTT GCGGCTGGTC
GCGGACGACC TCGGCGAGGA CGCGGTGCTG GCGGTGGCCG CCGAGTACGG GCCGGGGGCG
GAGGCCGGGG TGCGCGCGCT GTTCGACCGC GACCCGCTGG CGCTGCTGCC GCGCACCCGG
CCGTCGACGC CGGAGTGGGC GAACCCGCTC ACCCTGCCGC CGGTGCTGCT GCGCGACGGC
GGTCCCGCGC TGCCCGCCGC GGCGGTGGCG AACCTGCTGG CGGTGCTGGC CGTGCCCGAC
GAGCGCGCCC GGCGCGCCGG GCTGGTCCCG GTGCGCGAGG TGTGCGACCC GGCGTCGCTG
GCGGCGTTCG GCCGGGCGCT GCTGCGCGCC TGGCTGGCCG AGGGCGCGCT CCCGGCGGGC
GGCTGGGCGC TGACCGCGCA GGGCGTGATC GGCGACGACG AGACCGCGCG CGAGCTGGCC
GGGCTGATCG ACCGCTGGCC GGGTGAGGGG GCGTTCCAGC GTGCGGTGAC CGGGCTGGGC
GCGCTCGGCT CGATCGGCAC CGACACCGCG CTGCGGGCCG TGGACCTGTT GGCGCGCAAG
GGTTCCACCA AGGGACTGCG GGAGCGGGCG GCGGAGGCGA TCGCCCTCGC CGCCGCCGGG
GCGGGGCTGG ACCCTGAGCA GCTGGCCGAC CGGCTGGTCC CCGACTGCGG GATCGGCGCG
GGGGTGGTCC TGGACTACGG GCCGCGCTCC TTCCCGGTCG AGTTCGACCG GTCCCTGACG
CCGCTGGTGG TGCTCCCGGA CGGCAGGCGC CGCAAGAGCG CTCCCACCCC GGCCGCGACC
GACGACCCGG AGCTGGCCGC CGCCGCGCGC GCCCGGTTCT CGTTGCTGCG CAAGGAGATC
ACGAAGGTCG CCGCCGAGCA GGCCGAGCGG CTGGAGCGGG CGATGGTGGT GGGGAGGCGG
TGGCGCGGGG ACGAGTTCCG CGCGCTGTTC ACCACCCACC CGCTGCTGTC CCACCTGGCG
CTGCGGCTGG TGTGGGCGGT GTTCGCCGAG GACGGGCCGC GGCCGTTCCG CCTGGCGGAG
GACCGCACGG CGGCCGACGT GGCGGACGCG CTGGTGGAGC TCGCCGACGA CGCGGTGATC
GGCCTCGCGC ACCCGCTGCA CCTGGCCGGG GCGATCCCGG TGTGGTCGGA GCTGTTCGCC
GACTACGAGG TGGTGCAGCC GTTCCCGCAG CTGGGCAGGC CGTGGGCGGC GCTCACCGAG
GCCGAGCGGG CGGGGTCGTC GCTGTCGCGC TTCGCCGGGG AGAAGGCCGC GCCGGGCAGG
CTGCTGGGGT TGATCGGCAA GGGCTGGAGC CGGGACGCCT CCGCTGCGCC GTCCGCGCCG
CCGTGGCTGC GCAGGCGCCT GGACGAGGGG CGCTGGGCGC TGCTCGACCT GGACCGGGGG
TTGCCGTTCT CGTCCTTCGA GCACCTCCCG CACCTGCTGC TGGGCGAGCT GCGCCTGTCG
GCGACCGGCG GTCCCGGCCG CGACCCCGGC GACCCGCCGT TCAGCGGGCT GGACCCGGTG
CTGGTGTCGG AGCTGCTGGC GGACGTGGGC GGGACCCTGG CGCGCTGA
|
|---|
| Protein sequence | MGGRVSSEDA YVMGGAQARQ VLPRRGDGRE GRALTPDAAE RVRGLIAAAR ESLAEDGRGG
ALANALEEHL AAPGPVSAGI VHRIVEHASG TWQAEETACF VDAWVAEHGV VFAAEAALCS
ALHRIDRDGA LTGRFDTEAV EWSWAGHRPL ARVRHALAAA SDAEHAAAVE RVAAHRGTLR
GRTLAAFLLP TETGWVGPLF EELAGLRSAF ITPWLFLGSV GDREWLEALV DRCPVEGVTA
PSWVLPTLVD AVGPEGVLPT LVRWLPRLPA AARKRVLGLV AEFPLDEAFA VLAGQGPPGV
KPLRDAVKRF PERAARLAPA ELLPAPADPL PEARADEPVR LPRPLVDPPW EVAPVVERVV
VPGLTPIDRP GVVWRPGERE EWLERELFSL LTDPTAPADW SRALDEVARA NDGQAGHPVL
LLAPEEPARR VVVAWRPENA GGFWAWGPRL VARFGVDAAG VVAHVGATRR DRAVEVAAPL
VSAAIATLFA EWGDRLKSMR GPAAAYFARH GVEAARPLVP AALGTREGPR RAAERALRLV
ADDLGEDAVL AVAAEYGPGA EAGVRALFDR DPLALLPRTR PSTPEWANPL TLPPVLLRDG
GPALPAAAVA NLLAVLAVPD ERARRAGLVP VREVCDPASL AAFGRALLRA WLAEGALPAG
GWALTAQGVI GDDETARELA GLIDRWPGEG AFQRAVTGLG ALGSIGTDTA LRAVDLLARK
GSTKGLRERA AEAIALAAAG AGLDPEQLAD RLVPDCGIGA GVVLDYGPRS FPVEFDRSLT
PLVVLPDGRR RKSAPTPAAT DDPELAAAAR ARFSLLRKEI TKVAAEQAER LERAMVVGRR
WRGDEFRALF TTHPLLSHLA LRLVWAVFAE DGPRPFRLAE DRTAADVADA LVELADDAVI
GLAHPLHLAG AIPVWSELFA DYEVVQPFPQ LGRPWAALTE AERAGSSLSR FAGEKAAPGR
LLGLIGKGWS RDASAAPSAP PWLRRRLDEG RWALLDLDRG LPFSSFEHLP HLLLGELRLS
ATGGPGRDPG DPPFSGLDPV LVSELLADVG GTLAR
|
|---|
| |