Gene Amir_4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4292 
Symbol 
ID8328489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5054017 
End bp5055105 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content75% 
IMG OID644944759 
ProductEpoxide hydrolase domain protein 
Protein accessionYP_003101992 
Protein GI256378332 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGAATC ACCCGGTTCT CTCCGTGTCC GACGACGACC TGGCAGACCT GCGCGACCGA 
CTCCGCCGCA CCCGCTGGGC CACGCGCTGG CCCTCCCCCG CCTGGGAGGC GGGCACCGAC
CCCGACGAGC TGGAGCGGCT GGCCCGCCAC TGGGCCGACG GCTACGACTG GCGCGCCCAC
GAGGCCGAGA TCAACGCCCT CCCGTCGCAC TTCGCCGAGG TCGACGGCGT CCGGCTGCAC
TACCTGCGCC ACGACGGCGC GGGCGACGCG CTGCCGCTCG TGCTCACCAA CGGCTGGCCG
AGCACCTCCT ACGAGCTGGT CGGACTCGCG GAGCGCTTGG CCGCCAGGGG TTTCACCACG
ATCGTCCCGT CGCTGCCCGG CTACCCGCTC TCCGCGCCAC GACCGTCGCT CACCTCCACC
CCCACCCACG AGCTGTGGCA CCGGCTGATG CGTGAGGAGC TGGGCTTCGC CCGCTACGGC
GCGCACGGCG GCGACCTCGG GGCGGGCGTG TCGACGCTGC TCGCCAAGGC GCACCCCGAG
TCCGTGGCCG GCCTGCACCT GATGGCCGTC GCCCCGCCCG CCCAGCACGA CGCCGGTTCG
CTGACCGACG CCGAGCGCGC GCACGTCGGG CGGGCGCGGG CGTGGTGGGA CGAGGAGGGC
GCGTACGAGC ACCAGCACCG GACCCGCCCG CTCACGCTCG CGCCCGCGCT GTCCGACTCG
CCGGTCGGCC TGCTGTCGTG GGTCCTGGAG AAGTACCGCG CGTGGAGCCA CACCGGGCTG
CGCGCGCACA GCGACGACTT CCTGCTCACC CAGGCGTCGC TGTACTGGTT CACGAACTCG
ATCGGGACGT CGCTGCGGCC GTACTACGAG CGCGGTCGCG CGCCGGAGCC CGAGGCGGGC
CGGGTGGACG TGCCGACCGC CGTGGCGCTG TTCCCCGGCG ACCTGGCGAC CCCGCCGAGG
GAGTGGGCCG AGCGGACCTA CCGGGTCGTG CGGTGGACCG AGATGCCGCG CGGGGGCCAC
TTCGCGCCGG TCGAGGAACC GGAGCTGCTG GCCGACGACC TGGCGGGGTT CTTCGGCGAC
CTGCGCTGA
 
Protein sequence
MSNHPVLSVS DDDLADLRDR LRRTRWATRW PSPAWEAGTD PDELERLARH WADGYDWRAH 
EAEINALPSH FAEVDGVRLH YLRHDGAGDA LPLVLTNGWP STSYELVGLA ERLAARGFTT
IVPSLPGYPL SAPRPSLTST PTHELWHRLM REELGFARYG AHGGDLGAGV STLLAKAHPE
SVAGLHLMAV APPAQHDAGS LTDAERAHVG RARAWWDEEG AYEHQHRTRP LTLAPALSDS
PVGLLSWVLE KYRAWSHTGL RAHSDDFLLT QASLYWFTNS IGTSLRPYYE RGRAPEPEAG
RVDVPTAVAL FPGDLATPPR EWAERTYRVV RWTEMPRGGH FAPVEEPELL ADDLAGFFGD
LR