| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4291 |
|---|
| Symbol | |
|---|
| ID | 8328488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5053448 |
|---|
| End bp | 5053948 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644944758 |
|---|
| Product | protein of unknown function DUF1470 |
|---|
| Protein accession | YP_003101991 |
|---|
| Protein GI | 256378331 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCACGTGG TCGAGGCGTT CCTCAACACG CTCGACGAGC GGACGTTCAG CAGGCACGGC
GAGGCGCACG CGCCGACGGA CGAGCTGACC TCCGAGGCGG CGCTCGCGCA CTGGCTGGCG
CGCCACGGCC TGGCGCCCGA GGGGGTCCGC CCGAGCGCCG CGCACCTGGC GGCGGCGCGG
GAGCTGCGCG CCGCGCTGCG CCGCTCGCTG GCGGAGCCGG TCACCACACC GCTCGCGTTC
CCGCTCCGGC TCGTCCCGGA CGGCGAGGGG GGCCTGCGCG TCGCGGCGGA ACCGGTGGCG
CCGGGCGTGG ACGCGCTGCT GGACCTCGTG GTGGCGGCCG TCGGCGACGG GCGGTGGCGG
CGGGTGCGGC TGTGCGCGGC ACCGGACTGC CGGTGGGCGT TCTACGACAC CTCCCGCAAC
GGCGGCGGGC GGTGGTGCTC GATGGCGGTG TGCGGCAACC GGACCAAGAC GAAGGCGTAC
CGGCAGCGGC GGACGGGCTG A
|
|---|
| Protein sequence | MHVVEAFLNT LDERTFSRHG EAHAPTDELT SEAALAHWLA RHGLAPEGVR PSAAHLAAAR
ELRAALRRSL AEPVTTPLAF PLRLVPDGEG GLRVAAEPVA PGVDALLDLV VAAVGDGRWR
RVRLCAAPDC RWAFYDTSRN GGGRWCSMAV CGNRTKTKAY RQRRTG
|
|---|
| |