Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4278 |
Symbol | |
ID | 8328475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5040280 |
End bp | 5040879 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644944745 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003101978 |
Protein GI | 256378318 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCCG ACCGGCCCGC CGAGGCCCCC CGCAGCCGCA AGCCCCGCGT GGACGCCGCG CGCAACCAGG AGGCGATCGT CGAGGCGGCG GCCCGCGTGC TGGCCGAGCA GGGCGCGGCC GTCGACGTGC GCGAGATCGC CCGGCTGAGC GGCGTCGGCA TGGGCACCCT GTACCGGCAC TTCCCCACCA AGGAGGACCT GGTCCGCACG ATCCTGCGGC GCGAGTTCCT GACCTGGGCG GCGTCGGCGC GCGAGGCGGC GGAGCGCGCG GAGGACCCGT GGGCGGCGCT GGCGGACTTC TTCCGGCAGG CGCTGAGCGG CTACGCCAGG CACCGCGCGA TCTCGGAGTG CTTCGCGCTG GCCTGGGCGG AGCCGGACGT GGAAGGGCTG GGCGAGTTGC GGGCGGTGAT CGGGGGGCTG ACCGCGCGCG CCCACGAGGC CGGGTCGCTG CGCCCGGACG CGAGCGCGGA CGACCTGCTG CTGCTCCTGG TGTCCCTGGG GCACGCCGCC CGGCTGACCG GGGACAGCGA CCCGGAGCAG GTCGAGCGGC TGCTGCGGGT GTCGCTGGAC GGACTGCGGC CGGGGCACGC GGAGCGGTAG
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Protein sequence | MTADRPAEAP RSRKPRVDAA RNQEAIVEAA ARVLAEQGAA VDVREIARLS GVGMGTLYRH FPTKEDLVRT ILRREFLTWA ASAREAAERA EDPWAALADF FRQALSGYAR HRAISECFAL AWAEPDVEGL GELRAVIGGL TARAHEAGSL RPDASADDLL LLLVSLGHAA RLTGDSDPEQ VERLLRVSLD GLRPGHAER
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