| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4238 |
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| Symbol | |
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| ID | 8328431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4990794 |
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| End bp | 4996277 |
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| Gene Length | 5484 bp |
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| Protein Length | 1827 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644944702 |
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| Product | Carbamoyl-phosphate synthase L chain ATP- binding |
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| Protein accession | YP_003101939 |
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| Protein GI | 256378279 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCACTC GTGTCGCCAT CGTCAACCGC GGTGAGGCCG CCATGCGGCT CATCCACGCC
GTCCGGGACC TGTCCGCGGA GACCGGGAGG CGCATCGAGA CCGTCGCCCT CTACACCGAC
GCGGACCAGG GCTCGACGTT CGTCCGCGAG GCGGACCTCG CGTACTCCCT CGGTCCGGCC
TCGGCCCGCC CCTACCTGGA CCACGCGGTC CTGGAGCGCG CCCTGCTGGA GACCGGGGCC
GACGCGGCCT GGGTCGGCTG GGGCTTCGTC GCCGAGGACC CGCTGTTCGC GGAGCTGTGC
GACCGGATCG GCGTGACCTT CATCGGCCCG TCCGCCGAGG CCATGCGCAA GCTCGGCGAC
AAGATCGGCG CGAAGCTGAT CGCCGAGGAG GTCGGCGTCC CGGTCGCGCC GTGGAGCAAG
GGCGAGGTCG CCACCCTGGA GGACGCGCTC AGCGCGGGCG CCCGCATCGG CTACCCGCTG
ATGCTCAAGG CCACCGCCGG TGGCGGCGGG CGCGGCATCC GCATGGTCGC CTCCGCCGAG
GACCTCACCG AGGCCTACGA GCGCACCAGC CAGGAGGCGC TGCGCGCCTT CGGCTCCGGC
ATCGTGTTCC TGGAGCGCCT GGTCACCGGG GCCCGGCACG TCGAGGTGCA GGTCATCGCG
GACGGCCAGG GCACCGCCTG GGCCCTCGGC GTGCGGGACT GCTCCGTGCA GCGCCGCAAC
CAGAAGATCA TCGAGGAGTC GGCGTCCCCG GTCCTCGATC CCGAGCAGAC CGCCGAGCTC
AAGGCCTCCG CCGAGCGCCT CGCGCTCGCC GTGGACTACC GGGGCGCGGG CACCGTCGAG
TTCCTCTACC ACCCCGGCGA GAAGCTGTTC GCGTTCCTGG AGGTCAACAC CCGCCTCCAG
GTCGAGCACC CGATCACCGA GATCACCACC GGCACCGACC TGGTCAAGCT CCAGCTGCAC
GTGGCGTCCG GCGGCAGGCT GGAGGGCCCG CAGCCGGTCG AGAGCGGCCA CGCCGTGGAG
GCCCGGCTCA ACGCCGAGGA CCCCGACCGC GACTTCGCCC CCTCGCCCGG CCGCATCACC
CGCCTCGTGC TGCCCTCCGG CCCCGGCATC CGGGTGGACA CCGGCGTCAG CGAGGGCGAC
AGCATCCCCG CCGACTTCGA CTCGATGATC GCCAAGATCA TCGCCTACGG TCGGGACCGC
TCCGAGGCGC TCGGCCGCCT GCGCCGCGCC ATGGCCGAGA CCACCGTCGT CATCGAGGGC
GGCGCCACCA ACAAGAGCTT CGTGCTCGAC CTGCTCGACC AGCCCGAGGT GATCGACGCC
AGCGCCGACA CCGGCTGGAT CGACCGGGTC CGCGCCGAGG GCGGCCTGGT CGTGCACCGG
CACTCCGGCG TCGCGCTCGC CACCGCCGCC ATCGCCTCCT ACCTGGAGGA GGAGGCGGTC
AGCCGCCAGG GCCTGCTGGC CACCGCGTAC GGCGGCCGTC CCCAGGTGCA GCACGAGACC
GGCCGCCCGC TGAACCTGAA GCTGCGCGGC GCGAGCTACC AGGTCACCGT GGCCCGCGTC
GGCCGCTCCC GCTTCCGCGT GGGCGTCTCC GGCGGCGGCG CCGTGCACAC CGCCGACGTC
GAGGGCGAGC GCTTCGACGA CCACAGCGGC CAGGTCACCG TCAACGGCCG CCGCCACCGG
CTCGTCGTCG CCACCCACGG CCCCGTGCAC CTGGTCGAGG TCGACGGCGT CGCGCACCGC
ATCAGCCTGG ACGAGGGCGG CGTCGTCCGC TCGCCCGCGC CCGCGCTGGT CGTGGCCACC
CCGGTCGCCG TCGGCGACGA GGTGGACGCG GGCACGCCCG TGCTGGTGCT GGAGAGCATG
AAGATGGAGA CGGTGCTGCG CGCGCCGTTC CGCGCGCGCG TCCGGGAGCG CCCGGTGTCC
GTGGGCAGCC AGGTCGCCAC CGGCGCGCCG CTGATGCGCC TGGAGCCGCT GGCCGACGGC
GCCACCGCCG AGGCCGAGAC CGCCGCCGTC GAGGTGCCGG TCGACCTGCC CGCCGAGCCC
GACGGCGTCG CCGCCGACGC CCGGTTGGGC CGCTGCCTGT CCGACCTGCG CAGCCTGCTG
CTGGGCTTCG ACGTCGACCC GCAGGACCGG GGCCGCGTCC TGTCCGGCTA CCTGGCCTCG
CGCGCCGAGC TGGGCGGCCG TCCCGTCGAG GGCGAGCTGG ACCTGCTCAC CGCGTTCGCC
GACCTGTCCG AGCTCAGCCG CAACAAGCCG CGCGGCGAGC TGGAGGCCGA GCCGGGCAGC
CCCGTGCACA GCCCGCGCGA GCACTTCCAC GCCTACCTGC AGAGCCTGGA CGTCGAGCGG
GCAGGCCTGC CCGAGGACTT CACCGCGAAG CTGTCGCGGG TGCTCGCCCA CTACGGCGTC
ACCGAGCTGG ACCGCACCGC GCCCGGCCTG GAGTCGGCGG TCTTCCGGAT CTTCCTGGCC
CAGCAGGACC CGGCCGCGCA CGCCGCGGTC ATCTCCGAGC TGCTGCGCCA GTGGATCGAG
TCCCCGCCGC CCGCCGAGCC GCTGCTCCAG CGCGCCGGTC TGGCCCTGGA GCACCTCGTC
GAGGCCACCC AGGTCCGCTT CCCCGCGCTG TCGGACCTGG CGCGCGGCAT CGTGTTCCGC
TGGTTCGCCC AGCCGCTGCT GCGCCGCAAC CGCGCCAAGG TGTTCGTGGA GGTCCGCGAC
TCGCTGCGCC ACCTGGACCA GAACCCGGAC GCGCCCGACC GCGCCGAGCG GATCAAGGCC
ATGGTCGCGG GCCCGCAGCC GCTGGTGCGC CTGGTCTCCG GCCGCGTCGG CCGCCCCGAC
CGGGACAGCG GGCCGCTGCT GGAGGTGCTG ACCCGCCGCT ACTACGGCAA CCGCAGGCTC
ACCTCGGTCA CCACCACCGA CCTGTCCGGC TGCCGGTTCG TCACCGCCGA CTACGACGGC
GCCAACGGCG TGCGCCGGGT CGTGGCCACC GCCGTGGACA TCGGCTCGCT GCCCGCCGCC
GTCGACGCGG TCGGCCGCAT CGCCGCCGCG GGCGAGGGCG GCCTCGCGGC CGACCTGTAC
CTGATCTGGG AGGGCCAGCC CGACATCGAG GGCATGGCCG TGCGGCTGGC CGAGGTCCTG
TCGGCGCACC CGCTGCCCGA GTCGGTCCAC CGGGTCACCA CGACCGTCGC GGGCTCCACC
GGCGCGGTCA TGCACCACCA CTTCACGTTC CGCCCCGAGG GCGGGAAGCT CGTGGAGGAC
CGGCTCATCC GAGGCCTGCA CCCGCAGATC GCCCAGCGCC TGCAGCTGCA CCGGCTGCGC
GAGTTCGACC TGACCAGGCT GCCCTCGGTG GACGAGGAGA TCTACCTGTT CAAGGCCACC
GCGCGCAGCA ACCCGGCCGA CGAGCGGCTC ATCGCCATGG GCCAGGTCCG CGACCTGACC
CCGCTGCGCG AGTCCGACGG CAGGCTCGTC GCGCTGCCCG CCGTGGAGGA GGCCATCACG
GCCTGCCTCG ACTCGATCCG CAACATCCAG GCGAAGCGCC CGCAGAACAA GCGCTTCGAC
ACCAACCGGA TCATGATGTA CGTCTGGCCG TCCACCGAGC TGACCCCGGA CGAGCTGAAC
ACGCTGGTCG AGCGCATCCT GCCGACCGCG GTCGGCGCGG GCCTGGAGGA GGTCCAGTTC
CTGGCCCGCC AGCGCACCTC GTCCGGCGAC CTGGCCGAGG TGGCGGTGCG GATCGCGCTC
GACCCCGGCC ACGGCGCCAC GCTGCACGTG GGCGAGCCGT CGAACGAGCC GGTGCTGCCG
CTGGACGACT ACGGCCAGAA GGTCGTGCGG GCGGCCAGGC GCGGCAACAC CTACCCGTAC
GAGCTGGTGG GGATGCTCAC CGGGACCGAG GGGAAGTTCG TCGAGCACGA CCTGGACGAG
CACCGCGCGC TCGTGCCCGT CGACCGGCCC AGGGGCCGCA ACACCGCCGC GCTCGTCGCG
GGCGTGATCA GCACCCCGAC CGACCGGCAC CCCGAGGGCG TCACCCGCGT GATCCTGCTC
GGCGACCCGA CCAAGGCGCT CGGCGCCCTG TCGGAGCCCG AGTGCGCGCG GATCATCGCC
GCGATCGACC TCGCGGACCG GATGGACGTG CCGCTGGAGT GGTTCGCGCT CTCGGCGGGC
GCCCGGATCT CGATGACCTC CGGCACCGAG AACATGGACT GGGTCGCGGC GGCGCTCAAG
CGCATCGTCG AGTTCACCCA GGACGGCGGC GAGATCAACA TCGTGGTCGC GGGCATCACC
GTCGGCGCCC AGCCGTACTG GAACGCCGAG GCCACGATGC TCATGCACAC CAAGGGCATC
CTGGTCATGA CGCCCGACTC GGCCATGGTG CTCACCGGCA AGCAGTCGCT GGACTTCTCC
GGCGGCGTCT CGGCCGAGGA CAACTTCGGC ATCGGCGGCT ACGACCGCGT CATGGGACCC
AACGGGCAGG CGCAGTACTG GGCGCCGAAC CTGGCGGGCG CGCGCGACGT GCTGATGTCG
CACTACGACC ACTCGTACGT CGTGCCCGGC GAGACCGGCC CGCGCCGCGC GCCGACCGCC
GACCCGGCCG AGCGCGACGT GTCCGGCTTC CCGCACGCCG TGGCGGGCAG CGACTTCGCC
ACCGTGGGCC AGATCTTCTC GGCCGAGCAC AACCCGGACC GCAAGAAGCC GTTCGACATC
CGCACCGTCA TGCGCGCCGT CACCGACCAG GACCACCCGG TGCTGGAGCG CTGGGCGGGC
ATGGCCGACG CGGACACCTC GGCGGTGCAG GACGCCCGCA TCGGCGGCTG GCCGGTGTGC
CTGATCGGCA TCGAGTCCCG CTCGGTGCCC CGTCGCGGCT TCCCGCCCAC CGACGGCCCG
GACACCTACA CGGCGGGCAC GCTGTTCCCG CGCTCGTCCA AGAAGACCGC GCGGGCCATC
AACGCCGCGT CGGGCAACCG GCCGCTGGTG GTGCTGGCGA ACCTGTCCGG GTTCGACGGC
TCGCCGGAGT CGATGCGCAA GCTCCAGCTG GAGTACGGCG CGGAGATCGG CCGGGCCGTG
GTGAACTTCC AGGGCCCCAT CGTGTTCTGC GTGATCTCGC GCTACCACGG CGGCGCGTTC
GTGGTGTTCT CCAAGGCGCT CAACCCGAAC ATGACGGTGC TGGCGCTGGA GGGCTCGTTC
GCCTCCGTGC TCGGCGGCGC GCCCGCGGCG GCCGTGGTGT TCTCCGGCGA GGTCAACAAC
CGCACCGCCA CCGACCCGCG CGTCACCGAG CTGCAGGCGC TCGTCGCGGC GGCCACGGGC
GCGGAGCGGG CCTCGCTGAA CACCCGGCTG GCCGAGGTGC AGTCGTCCGT GCGGGCCGAG
AAGCTCGGCG AGGTCGCGGC CGAGTTCGAC CGGGTGCACA GCATCCAGCG CGCGGTCGAG
GTCGGCTCGG TGGACGAGAT CATCAGCGTG GCGCAGCTGC GCCCGAGGAT CATCGAGGCG
ATCGACCACG CGCTGAAGGG GTGA
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| Protein sequence | MFTRVAIVNR GEAAMRLIHA VRDLSAETGR RIETVALYTD ADQGSTFVRE ADLAYSLGPA
SARPYLDHAV LERALLETGA DAAWVGWGFV AEDPLFAELC DRIGVTFIGP SAEAMRKLGD
KIGAKLIAEE VGVPVAPWSK GEVATLEDAL SAGARIGYPL MLKATAGGGG RGIRMVASAE
DLTEAYERTS QEALRAFGSG IVFLERLVTG ARHVEVQVIA DGQGTAWALG VRDCSVQRRN
QKIIEESASP VLDPEQTAEL KASAERLALA VDYRGAGTVE FLYHPGEKLF AFLEVNTRLQ
VEHPITEITT GTDLVKLQLH VASGGRLEGP QPVESGHAVE ARLNAEDPDR DFAPSPGRIT
RLVLPSGPGI RVDTGVSEGD SIPADFDSMI AKIIAYGRDR SEALGRLRRA MAETTVVIEG
GATNKSFVLD LLDQPEVIDA SADTGWIDRV RAEGGLVVHR HSGVALATAA IASYLEEEAV
SRQGLLATAY GGRPQVQHET GRPLNLKLRG ASYQVTVARV GRSRFRVGVS GGGAVHTADV
EGERFDDHSG QVTVNGRRHR LVVATHGPVH LVEVDGVAHR ISLDEGGVVR SPAPALVVAT
PVAVGDEVDA GTPVLVLESM KMETVLRAPF RARVRERPVS VGSQVATGAP LMRLEPLADG
ATAEAETAAV EVPVDLPAEP DGVAADARLG RCLSDLRSLL LGFDVDPQDR GRVLSGYLAS
RAELGGRPVE GELDLLTAFA DLSELSRNKP RGELEAEPGS PVHSPREHFH AYLQSLDVER
AGLPEDFTAK LSRVLAHYGV TELDRTAPGL ESAVFRIFLA QQDPAAHAAV ISELLRQWIE
SPPPAEPLLQ RAGLALEHLV EATQVRFPAL SDLARGIVFR WFAQPLLRRN RAKVFVEVRD
SLRHLDQNPD APDRAERIKA MVAGPQPLVR LVSGRVGRPD RDSGPLLEVL TRRYYGNRRL
TSVTTTDLSG CRFVTADYDG ANGVRRVVAT AVDIGSLPAA VDAVGRIAAA GEGGLAADLY
LIWEGQPDIE GMAVRLAEVL SAHPLPESVH RVTTTVAGST GAVMHHHFTF RPEGGKLVED
RLIRGLHPQI AQRLQLHRLR EFDLTRLPSV DEEIYLFKAT ARSNPADERL IAMGQVRDLT
PLRESDGRLV ALPAVEEAIT ACLDSIRNIQ AKRPQNKRFD TNRIMMYVWP STELTPDELN
TLVERILPTA VGAGLEEVQF LARQRTSSGD LAEVAVRIAL DPGHGATLHV GEPSNEPVLP
LDDYGQKVVR AARRGNTYPY ELVGMLTGTE GKFVEHDLDE HRALVPVDRP RGRNTAALVA
GVISTPTDRH PEGVTRVILL GDPTKALGAL SEPECARIIA AIDLADRMDV PLEWFALSAG
ARISMTSGTE NMDWVAAALK RIVEFTQDGG EINIVVAGIT VGAQPYWNAE ATMLMHTKGI
LVMTPDSAMV LTGKQSLDFS GGVSAEDNFG IGGYDRVMGP NGQAQYWAPN LAGARDVLMS
HYDHSYVVPG ETGPRRAPTA DPAERDVSGF PHAVAGSDFA TVGQIFSAEH NPDRKKPFDI
RTVMRAVTDQ DHPVLERWAG MADADTSAVQ DARIGGWPVC LIGIESRSVP RRGFPPTDGP
DTYTAGTLFP RSSKKTARAI NAASGNRPLV VLANLSGFDG SPESMRKLQL EYGAEIGRAV
VNFQGPIVFC VISRYHGGAF VVFSKALNPN MTVLALEGSF ASVLGGAPAA AVVFSGEVNN
RTATDPRVTE LQALVAAATG AERASLNTRL AEVQSSVRAE KLGEVAAEFD RVHSIQRAVE
VGSVDEIISV AQLRPRIIEA IDHALKG
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