| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4199 |
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| Symbol | |
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| ID | 8328392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4949211 |
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| End bp | 4950635 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644944663 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003101900 |
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| Protein GI | 256378240 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.876848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAGA AGCACCTGTT CAAGGCCGCC GCCGCGGCGG TCGGGCTGGG CGCGGTGATC
GCGCTGACCG TGGCCATGCC CTCGGCGCAG GCGGCCGTGC CCGCCGCCGG GAGCACCTAC
ACCATCGCGG TGAAGAACAG CGGGAAGTGC CTGGACGTCC TGGACGGCAA CACCGCCAAC
GGCGCGCTCG TGGCGCAGTG GGACTGCTGG GGCGGGACCA TGCAGCAGTG GACGCTGCGC
GGGTCCGGGT CGGGGACGTA CGCGCTGGCG AACGTCGCGA CCGGCAAGTG CCTGGACATC
CCGTACGGCA CGACCGAGCA CTACGTGCAG GCCCAGCAGT GGAGCTGCTC CGGCGACACG
ATGCAGCAGT GGCGGCTGAC CGCGTCCGGG TCCGGGACCT ACCAGCTGGT CAACGTGGCC
AGCGGGTTGT GCCTGGCCAA CAAGGACGCC GGTCAGGGCC TGGGCGTGGC GATCGTGCAG
GAGGGGTGCA CGGCCAACTC GAACAAGCAG TGGCTGTTCA CGCCGGTGTC CGGCCGGACC
TGGTCGGGCA CGCCCGACGG GTTCGCGGGC GCGGCGGGGA CGACCGGTGG CGCGGGCGGG
ACCGTGGTGA CCGCGACGAC CTTCGCCGAC CTAGTGAAGT ACGCGTCGGC CAGCACACCA
CACGTGATCC GGGTGGACCG GGCGATCACG GTGACGCCGT ACGGGAAGGA GATCCCGGTG
ACGTCGAACA AGACCATCGT CGGGGTCGGC ACGTCCGGGC AGATCGTGAA CGGCGGGTTC
ACCCTCAACG GCGTGTCGAA CGTGATCATC CGGAACCTCA CCATCCGCGA CACCCGCGTG
GCCTCGGACG ACCCGGACGA CAAGGACTTC GACTACGACG GCATCCAGAT CGACAGCTCC
ACCAAGGTCT GGATCGACCA CAACACCATC ACGCGGATGA ACGACGGCCT GATCGACAGC
CGCAAGGACA CCACCGACCT GACCGTGTCC TGGAACGTGC TGGCGGACAA CAACAAGTCC
TTCGGCATCG GCTGGACCGA CAACGTCACC GCCCGCATCA CGATCCACCA CAACTGGATC
CGCGACACCG ACCAGCGCAA CCCCAGCACC GACAACGTCG CCTACGCGCA CCTGTACAAC
AACTACCTGC AGAACGTGAA GTCCTACGGC AACTACGCGC GCGGCGCCAC GAAGATGGTC
CTGGAGAACT CGTACTTCGA CAAGGTCAAG GACCCCTACT ACAAGGACGA CACCGCCCAG
CTCAAGCAGA GCGGCAACGT GGTCGTCAAC TCCAGCGGCA AGCAGCAGAG CGGCGGGGCG
GCCTTCGACC CGAAGACGTT CTACAGCTAC GCGCTCGACC CGGCCGCCGA GATCCCGAAG
ATCCTCGGGA CGTACGCGGG GCCCCAGGGC AACATCGGGG GCTGA
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| Protein sequence | MRKKHLFKAA AAAVGLGAVI ALTVAMPSAQ AAVPAAGSTY TIAVKNSGKC LDVLDGNTAN
GALVAQWDCW GGTMQQWTLR GSGSGTYALA NVATGKCLDI PYGTTEHYVQ AQQWSCSGDT
MQQWRLTASG SGTYQLVNVA SGLCLANKDA GQGLGVAIVQ EGCTANSNKQ WLFTPVSGRT
WSGTPDGFAG AAGTTGGAGG TVVTATTFAD LVKYASASTP HVIRVDRAIT VTPYGKEIPV
TSNKTIVGVG TSGQIVNGGF TLNGVSNVII RNLTIRDTRV ASDDPDDKDF DYDGIQIDSS
TKVWIDHNTI TRMNDGLIDS RKDTTDLTVS WNVLADNNKS FGIGWTDNVT ARITIHHNWI
RDTDQRNPST DNVAYAHLYN NYLQNVKSYG NYARGATKMV LENSYFDKVK DPYYKDDTAQ
LKQSGNVVVN SSGKQQSGGA AFDPKTFYSY ALDPAAEIPK ILGTYAGPQG NIGG
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