| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4198 |
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| Symbol | |
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| ID | 8328391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4947727 |
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| End bp | 4949190 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644944662 |
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| Product | Pectinesterase |
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| Protein accession | YP_003101899 |
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| Protein GI | 256378239 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4677] Pectin methylesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.018397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGAAT CGAATGTGAG CGTTAACAAG CCGGGACGGA GGCGGGGCGC GCCGGCAACG
GCGCTGTCCG CCGTCGCCGT GGTCCTGATG GCGGGCGCGG CGGTGGTCGC CACGACCACG
GCCGCGTCCG CGGCCACCCC CGCGGCCGGG ACGACCTACA CCATCGCCGT GAAGAACAGC
GGCAAGTGCC TGGACGTCCT GGACGGCAAC ACGGCCAACG GCGCGCTGGT CGCGCAGTGG
GACTGCTGGA ACGGCGCCAT GCAGCAGTGG ACGCTGCGGG ACGCCGGGTC GGGCGCCTTC
ACCGTGGTCA ACGTGGCCAC GGGCAAGTGC CTGGACATCC CCTACGGCAC CACCGAGTAC
TACGTGCAGG CCCAGCAGTG GAGCTGCTCC GGGGACACCA TGCAGCGGTG GCGGTTCACC
GCCTCCGGGT CCGGGACGTA CCAGCTGGTC AACGTGGCCA GCGGGTTGTG CCTGTCGAAC
AAGGACGCCG GGCAGGGTCT CGGCGTGCCG GTCGTGCAGG AGGGGTGCAC GGCCAACTCC
AACAAGCAGT GGTTGTTCAC CCCTGCCGCG TCGGCGGAGA GGCCGACGGT GGCGGCTGAT
GGGACGGGGA CGTATCGGAA GGTGCAGGAC GCGGTGAACG CGGCGCCGTC GAACAGCTCG
GCGCGGACGG TGATCACGGT GAAGGCGGGG ACGTATCGCG AGGTGGTGAC GGTTCCGGCG
GACAAGCCGA ACATCACGTT GCGGGGGTTG GGGTCGGGTC CGTCGGGCAC GGTGATCGTG
TACAACAACA GCGCTTACAC GCACGGGACG TCGAACAGCG CGTCGTTCTT CGCGCGGGGT
GCGGGGTTCG TGGCGGAGAA CCTGACGATC TCGAACGATC TGGACGAGTC GAGTGTGCCG
TCGGGGGCGC AGGCGGTGGC GTTGCAGACG AACGCGGATC GGATCGTGCT GCGGAACGTG
CGGTTGTTGG GTGATCAGGA CACGTTCCTG GTCAACGACG CCACCCGCGC GTACGTGGTG
GACTCGTATG TCGAGGGGAC GGTGGACTTC GTCTTCGGCG GGGGGACGGT CGTGTTCCAC
CGGACGACGG TGCACGAGAA GCGTTCCGGT GGTGGGCCGA TCACGGCGGC GAGCACGGGG
GCGGGGAAGA AGTACGGGTT CCTGTTCTAC CGGTCGACGA TCACGGGTGC GGCGGACGAC
GTGACGCAGC TGGGTCGGCC GTGGCGTCCG GACGCGCAGG TGCTGTACCG GGAGTCGACC
CTGTCGGCGA CGGTCAGGAC GTCGGAGCCG TGGACGGACA TGTCGGACAA CAGCTGGAGG
AACGCCCGGT TCCTGGAGTA CCGGAACACG GGCAGCGGCG CGGGGTCGAA CTCGAACCGG
CCGCAGCTGT CCGACTCGCA GGCCGCTGAG TACACGCCCC AGAAGTACCT GGCCGGTAGC
GACGGCTGGA ACCCGATCAG CTGA
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| Protein sequence | MRESNVSVNK PGRRRGAPAT ALSAVAVVLM AGAAVVATTT AASAATPAAG TTYTIAVKNS
GKCLDVLDGN TANGALVAQW DCWNGAMQQW TLRDAGSGAF TVVNVATGKC LDIPYGTTEY
YVQAQQWSCS GDTMQRWRFT ASGSGTYQLV NVASGLCLSN KDAGQGLGVP VVQEGCTANS
NKQWLFTPAA SAERPTVAAD GTGTYRKVQD AVNAAPSNSS ARTVITVKAG TYREVVTVPA
DKPNITLRGL GSGPSGTVIV YNNSAYTHGT SNSASFFARG AGFVAENLTI SNDLDESSVP
SGAQAVALQT NADRIVLRNV RLLGDQDTFL VNDATRAYVV DSYVEGTVDF VFGGGTVVFH
RTTVHEKRSG GGPITAASTG AGKKYGFLFY RSTITGAADD VTQLGRPWRP DAQVLYREST
LSATVRTSEP WTDMSDNSWR NARFLEYRNT GSGAGSNSNR PQLSDSQAAE YTPQKYLAGS
DGWNPIS
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