| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4196 |
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| Symbol | |
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| ID | 8328389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4945227 |
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| End bp | 4947227 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644944660 |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003101897 |
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| Protein GI | 256378237 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00838745 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCTG CACGGGGCGC GCACCGCTTC GCGGTGGTCG CGGCGATCGC GCTGCTGGTC
CTCGGCGTCC TGTGGTGGGA CGTGCCGGGA GTGCTGCGCG CGGTCGGCAC CGGATCGATC
ACCGGACAGG CGTACGTGGA CGCGAACGAC GACGGCGTCC GGCAGGGCGG TGAGGCCGCG
CTGCCCGACC TGCCCGTCCG GCTCACCGGC ACGCGCGACA GCTGCCCGGT GGGCGAGCAG
CCCGCCTGCG CGGCGTCCGC GACCACGACC ACGTCCGCGG CCGGCGAGTT CACCTTCACC
GGCCTGGAGG CGGGCCTGTA CTCGGTCACC GCCGCCCGGC CCGCCGGGTA CGCCGACGGC
AAGTCCACGG CGGGCGCGGC GGGCGGCTCG CTGAGCGCCC CGAACCAGAT CAGCGGCATC
CGGGTCGACA GCGGCGCGTC CGCCACCGGG TACTCGTTCG GCATGAGGGT CGGGGCCGTC
ACCGGCACCG CGTGGGTCGA CAACAACGCC AACGGCACGA TCGAGGACGA CGAGCACGAG
TGGCTGGAGG ACGTGACCGT CACGCTCGTG AAGTCCGACG AGACCCCGGT CGCGACCACG
ACCACCTCCA CCACCGGCAA CTACAGCTTC GACGCCGTCC TGCCGGGCGA CTACGTCGTC
CGGGCGACCC TGCCCGCCGG GTACGGCGCG GCCTCACCCA CCTCGGTGCC GTTCACGCTG
GCGTCCGGGC AGGGCAGGCA CGTGGACTTC TCGATGGTCA AGGGCGCGCT GGGCAACTTC
GTGTGGCTCG ACGCCGACCG CGACGGGCTC CAGGGGATCG GCGAGGACGG GGTGCCCGGC
ATCGCCGTCG AGCTGCACCG CACGCCGGGC GGGGTGGTCG ACAGCCAGCT CACCGACGCC
AACGGCGAGT ACTACTTCGT GGGGCTGGAC GTGGGCACGT ACTTCATCCG AGTGATCAAG
CCAAGCGGGA CGGTGTTCAC CGAGCGCGAC AAGTCCGCCA CGGTCGGGTC GCACGTCGAC
GCGGACGGGT ACTCATCACC GGTCGAGATC AAGGTCGAGA ACAGCGGGAT CACCCAGGAC
ATGACCCTGG ACGCGGGCTT CTACGAGCTC GCGCAGGGCG AGACCCCGCC GACCACGACG
ACCACCACCA CCACCACCAC CACCACCGCT CCGACGACCA CAACCACGAC GACACCGACC
ACCACCACCA CGCCGACGAC GACCACCACG GGCCCGACGA CCACGACCAC GGGTTCGACG
ACCACGACCA CGGGCCCGAC GACCACGACC GGTCCGACCA CCACGACGGG CGCGACCACC
TCCACCACGC CGCCCACCAC AACCGCCCCC GGCACGACCA CGACCACCAC CACGCCCCCG
CCGCGCACCG ACCTGGGTGT GCAGTTCGCC GTGGACAACC CGAAGCCCGC CGTGGGCGAC
AAGGTCACGT TCACCACCGT GGTCGTCAAC CGGGGCACCG CGCCGGTGGA GGGCTCACGG
GTGACGATCA CCCTGCCGGA CGGCCTGCGT CCCGAGACCG GCACCGGCCA GAACCTCCGC
AGGGCGCTCC TGGCCCAGTC CGGCTGGACC TGCCAGGCGA CCGGCCAGCA GCTGGTCTGC
GCGAACCCGG CCACCGTCCA ACCGGGCGCC TCGTTCGAGC CGCTGACCGT GGTGACGACC
GCGACGGCCC CGGTCCTGCC GCAGGCGACC ACGGTCGCGG TCGCCCTGTA CGACGGCACT
CCCGACGACA ACCCGGACAA CGACGGCACG ACCCCGGCCC TCGCCATCCC GAGCACGACC
ACCCCGACCC CGGGCGTGGT GACCGAGCTG CTCCTCCCGA CCCAGCAGCC CACCACAACC
CCCCTGGCCA CCACGGGCCG CCCGGCGCAC GCGCTCCTGC TGACGGCCCT GGTCCTGATG
GTCCTGGGCG CGGGCCTGCT GGTCACCACC CGCAAGCCCG CCACCGGAGG CCGCCACCGC
GCGGCACGCC GGAGCGACTG A
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| Protein sequence | MPAARGAHRF AVVAAIALLV LGVLWWDVPG VLRAVGTGSI TGQAYVDAND DGVRQGGEAA
LPDLPVRLTG TRDSCPVGEQ PACAASATTT TSAAGEFTFT GLEAGLYSVT AARPAGYADG
KSTAGAAGGS LSAPNQISGI RVDSGASATG YSFGMRVGAV TGTAWVDNNA NGTIEDDEHE
WLEDVTVTLV KSDETPVATT TTSTTGNYSF DAVLPGDYVV RATLPAGYGA ASPTSVPFTL
ASGQGRHVDF SMVKGALGNF VWLDADRDGL QGIGEDGVPG IAVELHRTPG GVVDSQLTDA
NGEYYFVGLD VGTYFIRVIK PSGTVFTERD KSATVGSHVD ADGYSSPVEI KVENSGITQD
MTLDAGFYEL AQGETPPTTT TTTTTTTTTA PTTTTTTTPT TTTTPTTTTT GPTTTTTGST
TTTTGPTTTT GPTTTTGATT STTPPTTTAP GTTTTTTTPP PRTDLGVQFA VDNPKPAVGD
KVTFTTVVVN RGTAPVEGSR VTITLPDGLR PETGTGQNLR RALLAQSGWT CQATGQQLVC
ANPATVQPGA SFEPLTVVTT ATAPVLPQAT TVAVALYDGT PDDNPDNDGT TPALAIPSTT
TPTPGVVTEL LLPTQQPTTT PLATTGRPAH ALLLTALVLM VLGAGLLVTT RKPATGGRHR
AARRSD
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