Gene Amir_4179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4179 
Symbol 
ID8328372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp4917920 
End bp4918420 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content73% 
IMG OID644944643 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003101880 
Protein GI256378220 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.483943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGAGCG AGGAAGCCCC GAAGCCGCTG GACGTGGCCG AGCAGCGCGC GTGGGCGCTG 
CTGCTGGGCG TGACCACCTG GCTCCCGGCG GCGCTCGACG CGCACCTGCA GCGGGACGCC 
GGGATCAGCC ACAGCGAGTA CCAGGTCCTG TGGTGGCTCT CCACCAGCAC CGAGAAGGTG 
CTGCACATGA GCCAGCTCGC CGACAGCGCG GGCGTCACCG CCTCGCACCT GTCGCGGATC 
GTGGCGCGGC TGGAGAAGCG CGGCTGGATC ACCCGCAACC CCGACCCGGC GGACGGCCGG 
TACACCCAGG CCAGGCTGAC CGGGGAGGGC GAGCGCAAGG TCGCCGAGTG CGCGCCCGGT 
TACGCGACGG CGCTGCGCGC CAACCTGTTC GACCACCTCG CGGGGGACCA GGTGGACGAC 
CTGGCGACGC TGGCGTACGC AATCCTGCGC GAGCTGCGGC CGGTGTGCGT GAACCACCTG 
CCGGGGGAAC CGCCTGCCTG A
 
Protein sequence
MPSEEAPKPL DVAEQRAWAL LLGVTTWLPA ALDAHLQRDA GISHSEYQVL WWLSTSTEKV 
LHMSQLADSA GVTASHLSRI VARLEKRGWI TRNPDPADGR YTQARLTGEG ERKVAECAPG 
YATALRANLF DHLAGDQVDD LATLAYAILR ELRPVCVNHL PGEPPA