| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4177 |
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| Symbol | |
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| ID | 8328370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4915343 |
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| End bp | 4916635 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644944641 |
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| Product | Pectate lyase |
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| Protein accession | YP_003101878 |
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| Protein GI | 256378218 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTCGC GCAACCGATT AAACCTTTCT CCCCATTCGT GGAGAGTGCT CTCCGCGGTG
GGTGCGGTGG GGGCTCTGGT GGTCGCGCTG GTGGCCTGGC CGAGCGCCCC GCCCGCGTCG
GCCGCGGTGA GCGCTGGCAC GTACGTGGTC ACCAACGGCG GCAGCGGGCA GTGCCTCGAC
TCCGGCGGCG GCGCGAGCGG GTCGCAGCTG ACGCAGGCGT CGTGCGGCGG CTCCGCCGGC
CAGCGGTGGA CCCTCGCGGC GGTCAGCGGC GGCTTCCGGA TCACCTCGGC GGCGGGCCTG
TGCGCCGGGG TGCGGGACGA CTCCACGTCG GCGGGCAAGG TCGTGGAGCA GGTCGCGTGC
GGCAGCACCG GCAGCCAGAC CTGGACCCTC GTGGAGAGCG GCGGCAACCA CCGGGTGGTC
AACGCCAACG GCGGGAAGTG CTTGAACACC AAGGACAACT CGACCGCGTC GGGCGCCCCG
GTGCAGACCA ACTCGTGCGA CAGCGCGGCC ACCAAGCAGT GGTCGTTCAC CACCTCGGGC
GGCGGCACCC CGACCACCAC CACGACCACC GGCGGCGGCG GCCCCACGAC CACCACCACC
CCGCCGCCCG GCGGCGGCGT CGGCGACGGC CCGTGGCCGG GCGACACCGG CAGCGTGCAC
CAGACCACCA CGAAGAACGC GGGCACCTTC TTCGACGGCG GCCTCAAGCG CTACTACGGC
ATCGGCGACG GCGGCCAGGG CGAGAGCCAG GACCCGATGT TCGTCGTCGC CAACGGCGGC
ACGATCCAGA ACGTCATCAT CGACGCGCCC GCCGGTGACG GCATCCACTG CGAGGGCTCC
TGCACGATCC GCAACGTGTG GTGGAACGAC GTCGGCGAGG ACGCGGCCAC GTTCAAGTCC
GCCAGCTCCT CGGCGACCTA CCTGGTGGAC GGCGGCGGCG CGAAGTCCGG GACCGACAAG
GTGTTCCAGC ACAACGGGGC CGGGACGCTG ACCATCCGCA ACTTCCAGGT GCACAGCTCC
GGCAAGCTCT ACCGGGCCTG CGGGAACTGC TCCACCTCGT ACCAGCGGCA CGTGGTGCTG
GACGGGGTCA CCGCGCGCTC GACCAAGGTC CTGGTGGGGA TCAACACCAA CTGGGGCGAC
ACGGCCCGGT TCTCGCGGGT CACGGTCTAC GGGAGCACGA CGGTGTGCGA GAAGTACCAG
GGCGTGCCGA AGGGCAGCGA GCCCAAGAAG ATCGGCGAGG GGGCGGACGG CAAGAACTGC
CTGTACCAGC CCTCGGACAT CACCCAGCGG TAG
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| Protein sequence | MGSRNRLNLS PHSWRVLSAV GAVGALVVAL VAWPSAPPAS AAVSAGTYVV TNGGSGQCLD
SGGGASGSQL TQASCGGSAG QRWTLAAVSG GFRITSAAGL CAGVRDDSTS AGKVVEQVAC
GSTGSQTWTL VESGGNHRVV NANGGKCLNT KDNSTASGAP VQTNSCDSAA TKQWSFTTSG
GGTPTTTTTT GGGGPTTTTT PPPGGGVGDG PWPGDTGSVH QTTTKNAGTF FDGGLKRYYG
IGDGGQGESQ DPMFVVANGG TIQNVIIDAP AGDGIHCEGS CTIRNVWWND VGEDAATFKS
ASSSATYLVD GGGAKSGTDK VFQHNGAGTL TIRNFQVHSS GKLYRACGNC STSYQRHVVL
DGVTARSTKV LVGINTNWGD TARFSRVTVY GSTTVCEKYQ GVPKGSEPKK IGEGADGKNC
LYQPSDITQR
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