Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4173 |
Symbol | |
ID | 8328366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4909181 |
End bp | 4909930 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644944637 |
Product | peptidase E |
Protein accession | YP_003101874 |
Protein GI | 256378214 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3340] Peptidase E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.156253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACCTGC TGCTCTTCTC GAACTCGACC AATCACGGCG GGCGTCCCTA CGCCCACGCG CTGCCCGAGA TCCGCGACTT CCTCGCCGGT GTCGAGGACG CGCTCTTCGT GCCCCACGCG CTCGCCGACC ACGACGCGTA CACCGCGAAG GTCGCCGACG CGTTCGCCCC GGCGGGCGTG ACCCTGCGGG GTCTGCACCG CGAGGCCGAC CCGGTGGCGG CGGTGGCGTC GGCGGGCGCG GTCGTCGTCG GCGGCGGCAA CACGTTCCGG CTGCTGCGCT CCCTGCAGAG GCAGGGGTTG GACGTGGCGA TCCGCGAGGC GGTGCGCGCC GGGACGACCC GGTACGTGGG CGCCAGCGCG GGCACCAACA TCACCGCGCC GACCATCCGG ACGACCAACG ACATGCCGAT CGTGGAGCCG GGGTCGTTCG CGGCGCTGGG GCTGGTGCCG TTCCAGATCA ACCCGCACTT CATCGACGCG GACCCGACCA GCACGCACAT GGGCGAGACG CGGGAGACCA GGCTGCTGGA GTTCCTGGAG GAGAACGACG TCCCGGTGCT CGGGCTGCGG GAGGGCACGC ACCTGCGGGT GTCCGGGGAC GGGCGAGCGC AGGTGTGCGT GGTCGGCGGG ACGTCGGTCG CGGTGCGCGG GGGCGGGCCC GCGATCGTGT TCCGGCGGGG GAAGGACGCG GAGGAGGTGT CCGGGGACGT CAGCTCGCTG CTGGACGAGC GGGTGGCGTT CGACGGCTGA
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Protein sequence | MDLLLFSNST NHGGRPYAHA LPEIRDFLAG VEDALFVPHA LADHDAYTAK VADAFAPAGV TLRGLHREAD PVAAVASAGA VVVGGGNTFR LLRSLQRQGL DVAIREAVRA GTTRYVGASA GTNITAPTIR TTNDMPIVEP GSFAALGLVP FQINPHFIDA DPTSTHMGET RETRLLEFLE ENDVPVLGLR EGTHLRVSGD GRAQVCVVGG TSVAVRGGGP AIVFRRGKDA EEVSGDVSSL LDERVAFDG
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