Gene Amir_4173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4173 
Symbol 
ID8328366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4909181 
End bp4909930 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content73% 
IMG OID644944637 
Productpeptidase E 
Protein accessionYP_003101874 
Protein GI256378214 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3340] Peptidase E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.156253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCTGC TGCTCTTCTC GAACTCGACC AATCACGGCG GGCGTCCCTA CGCCCACGCG 
CTGCCCGAGA TCCGCGACTT CCTCGCCGGT GTCGAGGACG CGCTCTTCGT GCCCCACGCG
CTCGCCGACC ACGACGCGTA CACCGCGAAG GTCGCCGACG CGTTCGCCCC GGCGGGCGTG
ACCCTGCGGG GTCTGCACCG CGAGGCCGAC CCGGTGGCGG CGGTGGCGTC GGCGGGCGCG
GTCGTCGTCG GCGGCGGCAA CACGTTCCGG CTGCTGCGCT CCCTGCAGAG GCAGGGGTTG
GACGTGGCGA TCCGCGAGGC GGTGCGCGCC GGGACGACCC GGTACGTGGG CGCCAGCGCG
GGCACCAACA TCACCGCGCC GACCATCCGG ACGACCAACG ACATGCCGAT CGTGGAGCCG
GGGTCGTTCG CGGCGCTGGG GCTGGTGCCG TTCCAGATCA ACCCGCACTT CATCGACGCG
GACCCGACCA GCACGCACAT GGGCGAGACG CGGGAGACCA GGCTGCTGGA GTTCCTGGAG
GAGAACGACG TCCCGGTGCT CGGGCTGCGG GAGGGCACGC ACCTGCGGGT GTCCGGGGAC
GGGCGAGCGC AGGTGTGCGT GGTCGGCGGG ACGTCGGTCG CGGTGCGCGG GGGCGGGCCC
GCGATCGTGT TCCGGCGGGG GAAGGACGCG GAGGAGGTGT CCGGGGACGT CAGCTCGCTG
CTGGACGAGC GGGTGGCGTT CGACGGCTGA
 
Protein sequence
MDLLLFSNST NHGGRPYAHA LPEIRDFLAG VEDALFVPHA LADHDAYTAK VADAFAPAGV 
TLRGLHREAD PVAAVASAGA VVVGGGNTFR LLRSLQRQGL DVAIREAVRA GTTRYVGASA
GTNITAPTIR TTNDMPIVEP GSFAALGLVP FQINPHFIDA DPTSTHMGET RETRLLEFLE
ENDVPVLGLR EGTHLRVSGD GRAQVCVVGG TSVAVRGGGP AIVFRRGKDA EEVSGDVSSL
LDERVAFDG