Gene Amir_4170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4170 
Symbol 
ID8328363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4905880 
End bp4906599 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content74% 
IMG OID644944634 
ProductAroM family protein 
Protein accessionYP_003101871 
Protein GI256378211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000209007 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGACA GCGGCAGCAG GACCGTCACC CTGGGCGTCG TCACCATCGG CCAGACCCCG 
CGCGCCGACC TCACCCCCGA ACTGCGCGCC TGGCTGCCCG GTGTGCGGAT CGTGGAACGC 
GGCGCCCTCG ACGGCGTCAC CCCCGAGCAG ATCACCGAGT GGGCCCCCAC CGAGGGCGAC 
GAGGTCCTCA CCACCCGCCT GCGCGACGGC GGCTCCGCGA TCGTCGGCCA CCACCACATC 
GCCCCCAGGG TGCGAGCGGC GGTCGCCGAC CTGGAGGGGG CCGGGGTGGA CGCCGTCTAC 
CTGGCCTGCA CCGGCGAGTT CGGCGAGCTG GAGCACCGGG GCCCGGTGCT GCGACCCGAG 
TTCATGATCG GCCACGCGGT CGCGGCCATC GCCGCTGGCC TGACCACCGT GGGCGTCCTG 
GTCCCGCTCG AAGAGCAGAA GCACCACCCG GACACCAAGT ACGCCCCCCT GGACGCCGAG 
GTGGTCGTAG CGGTGGCCAC CCCGTACGCC GGCCCACCCG AGGCCGTGGC CGAGGGCCTG 
CGGGCCGCCG CGGCCGAGTT CAAGGCCGCA GGCGCACAAC TGATCGTCGC CGACTGCATC 
GGCTACACCC AGGCGATGCG CGCGGTCCTG GTGGCGGAAC TGGGCGTGCC CGTAGTGCTG 
GCCCGCTCGG TCGTGGCCCG CCTGGCCGCC GAACTCCTGG ACCGCGGAGC CGCCGCATGA
 
Protein sequence
MADSGSRTVT LGVVTIGQTP RADLTPELRA WLPGVRIVER GALDGVTPEQ ITEWAPTEGD 
EVLTTRLRDG GSAIVGHHHI APRVRAAVAD LEGAGVDAVY LACTGEFGEL EHRGPVLRPE 
FMIGHAVAAI AAGLTTVGVL VPLEEQKHHP DTKYAPLDAE VVVAVATPYA GPPEAVAEGL 
RAAAAEFKAA GAQLIVADCI GYTQAMRAVL VAELGVPVVL ARSVVARLAA ELLDRGAAA