| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4160 |
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| Symbol | |
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| ID | 8328353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4895017 |
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| End bp | 4896240 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644944624 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_003101861 |
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| Protein GI | 256378201 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGCG AAAACCCCCC GGAGCGACCG CTCACCGGGG TCAGGGTGCT GGACCTGTCC
AACGTCCTCG CCGGGCCGTA CGCGGGCTAC CAGCTCGCGC TGCTCGGCGC GGACGTGGTC
AAGGTCGAGG TCCCCGGCGT GGGCGACCTC GCCCGCCAGT TGGGCGCGTC CGCCGAGCTG
AACCGGCGCC GGCTGGGCGC GTCGTTCCTC GCGCAGAACG CGCAGAAGCG CTCCCTCACC
CTGAACCTGA AGTCGTCGCG CGGCAAGGAG GTCCTGCGCA GGCTCGTGCA GAGCGCCGAC
GTGCTCGTGG AGAACTTCCG CCCCGGCGTG CTGGAGCGGC TCGGCTTCGG CTGGGACGCG
CTGCGGGAGC TCAACCCCCG GCTCGTGTAC TGCGCGATCT CCGGTTTCGG CCAGACCGGG
CCGCTGCGCG CCAAGCCCGC GTACGACCAG ATCATCCAGG GCTACTCGGG GATGATGAGC
GTGACCGGCA CGACCGGCAC CGCCCCGCTC CGCGCAGGCT ACCCGATCGC GGACGTGCTC
GGCGGCCTGG CGGCGGCGTT CGCCGTGTCG TCGGCGCTGG TCGGGCGCGA GCGCACCGGG
GTGGGCTGCT CGATCGACGT GTCCATGCTG GAGACGGCGG TGACCGCGAT GGGCTGGGTG
GTGTCGAACC ACCTGATCGC CGGTCAGGCC CCGCGCCCGC TGGGCAACGA CAACGGCACG
GCGGCCCCGT CCGGCACGTT CCGCACCTCG GACGGCGACC TGAACATCGC GGCGAACAAG
CAGGAGCAGT TCGAGCTGCT CTGCGCCGCG CTGGGCAGGC CCGAACTCGT CGCCGACCCC
AGGTTCGCCG AGCGGGAGTC CCGCAAGGCG CACCGCGCGC AGCTCACCGC CGAGCTGGAA
GTGGCCCTCA CCAAGGAGAG CGCCGCGCAC TGGGAGGAGG CGCTCAGCTC CGCGGGCGTC
CCGGCGGCGG CCGTGCTGAG CGTGCCGGAG GTCCTGGCCA GCCCGCAGAT CGTGGACCGC
GGCCTGGTGC ACGAGCTGCC GTTCCCCGGC GGGGTGCTGC CGGAACCGCT GCGCGTGCTG
GGCAACGGCA TCCGCGTGGA CGACCGCCCG AGCACCCCGT CGCTCCCACC ACCCGTGCTG
GGGGAGCACA CGGACTCGCT GCTGGCCGAG CTGGGGTACG CCGCCGAGGA GATCGCGGCG
CTGCGCGAGG AGGGTTCGGT ATGA
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| Protein sequence | MTSENPPERP LTGVRVLDLS NVLAGPYAGY QLALLGADVV KVEVPGVGDL ARQLGASAEL
NRRRLGASFL AQNAQKRSLT LNLKSSRGKE VLRRLVQSAD VLVENFRPGV LERLGFGWDA
LRELNPRLVY CAISGFGQTG PLRAKPAYDQ IIQGYSGMMS VTGTTGTAPL RAGYPIADVL
GGLAAAFAVS SALVGRERTG VGCSIDVSML ETAVTAMGWV VSNHLIAGQA PRPLGNDNGT
AAPSGTFRTS DGDLNIAANK QEQFELLCAA LGRPELVADP RFAERESRKA HRAQLTAELE
VALTKESAAH WEEALSSAGV PAAAVLSVPE VLASPQIVDR GLVHELPFPG GVLPEPLRVL
GNGIRVDDRP STPSLPPPVL GEHTDSLLAE LGYAAEEIAA LREEGSV
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