| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4117 |
|---|
| Symbol | |
|---|
| ID | 8328310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4836901 |
|---|
| End bp | 4838868 |
|---|
| Gene Length | 1968 bp |
|---|
| Protein Length | 655 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644944581 |
|---|
| Product | ASPIC/UnbV domain protein |
|---|
| Protein accession | YP_003101818 |
|---|
| Protein GI | 256378158 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCTCCA CAGCCCGATG GCTGCGCGGG CAACTGCCCG GCGCGCTGGC GCTGGTGCTC
GTCGCGGCCT CGTTCACCGC GGCCCGGTCT CCGGAGGTGT CCGCGCAGGA GCGGCGGGAC
CTCGCCTCCC GCTTCGGGTT CGCCCCGGCC TCGATCGCCC TGCCCGGCGG GTTCACCCAG
CGCTCGATCC GCCCGGTGAA CCAGCGCTAC GCGCACATCA GCGCGTGGAT CTCCTCGGTC
GGCTCGGCGG TGGCGCTGAA CGACCTGGAC GGCGACGGGT TGTCCAACGA CCTGTGCTAC
GTGGACGTGC GCACCGACCA GGTCGTCGTC TCCCCCGCCC CCGTGGCGGG CCAGGCGCCC
CGCTACGAGC CGTTCGCCCT GTCCACGGGG TCGCTGCCGG TCGACGACGT GATGGCGCCG
ATGGGCTGCG TGCCCGGCGA CTTCAACGAG GACGGCCGCG TCGACCTGCT GGTGTACCTG
TGGGGCCGCA CGCCGGTCCT GCACCTGGCC AGGGCGGACG CCACCGCTCT CGCGCAGGAG
GCGTACGAGC CGGTGGAACT GGTGCCCGGC AACGGCTCCG GGACCTACGA CGGCCCGCGC
TGGAACTCGA ACTCGGCGAC GGTCGCGGAC TTCGACGGCG ACGGCCACGA CGACGTCCAC
ATCGGCAACT ACTTCCCCGA CGGACCGGTG CTGGACCCGG CGCAGAGCAC CGGCGTGGAG
ATGAACGCCT CCATGTCCAG CGCCCTCAAC GGCGGCGAGG ACCACGTGCT GCGCTGGACC
GGCGGCAGCG CGGGCGACCG GCCGACCGCG AGCTTCGAGT TCGCCGAGGG CGTGATCCCG
GACGAGGCCT CGCGCGGCTG GGCTCTGGCG TCCGGTTCCA ACGACCTGGA CGGCGACCTG
CTGCCCGAGC TGTACCTGGC GCACGACTTC GGCCCGGACC GCCTGCTGCA CAACGAGTCC
ACGCCGGGCG CGATCCGGTT CCGGATCGCC GAGGGCTCGC GCGGGCCGCT GGAGCCGAAG
TCGAAGAACG TCGGCCAGGA CTCGTTCAAG GGCATGGGCG TGGACTTCGG CGACCTCAAC
GGCGACGGCG TGTACGACAT GTACGTCAGC AACATCACCA CCTCGTTCGG CATCGAGGAG
TCGCACTTCG CGTTCCTGAG CACCACCGGC GACCGGTCCG AGGTGGCCCG CGAGCTGGGC
GCCGGGCGGG CGGTGTGGGA GGACGAGAGC GCGCCGCTGC ACGTGGCCTG GTCCGGTTGG
GGCTGGGACG TCAAGCTCGC GGACTTCGAC AACAGCGGCG GCCTGGAGAT CGCGCAGGCC
ACCGGGTTCG TGAAGGGGCA GGTGAACCGC TGGCCGCAGC TGCAGGAGCT GGCGACCGCG
AACGACGCGC TGCTGGCGAA CCCGCTGTGG TGGCCGGCGG TGGGGCCCGG TGACGACGTG
GGCGGGCACC AGCGGTTCGC GTTCTTCGCC CGCACCGGCG ACGAGGGGTT CTTCAGCGAC
CTGTCGCACG AGCTGGGCCT GGACGTCCCG GTGCCCACGC GGGGCATCGC GACCGGGGAC
GTGGACGGGG ACGGCAGGCT CGACATGGCG GTGTCCCGGC AGTGGGAGGA CCCGGTGTTC
TACCGCAACA CCTCGCAGCG GGCCGGGAAC TTCCTGGGGC TGCGGCTGAC CCACGAGGGG
CAGCGGCCGG AAAGCGGTTT CCCCGGCGCG GGCTCGCCGG TGATCGGCGC GCAGGTGGAG
GTGACGACGG CGTCGGGCCG GGTGCTGGTG AACCGGGTGG ACGGCGGCAG CGGGCACTCC
GGCAAGCGCG GGCACGAGGT CCACTTCGGA CTGGGCGAGG ACGACCGGGC GGTGCGCGCG
CGGATCTCCT GGCGCGATCG GACCGGGCAG GCGCACGAGC AGGAGCTGTC GCTGGAGCCG
GGCTGGCACG ACCTGCGGCT GGGCGAGCGG GTCGAGGAGG GCGAGTGA
|
|---|
| Protein sequence | MSSTARWLRG QLPGALALVL VAASFTAARS PEVSAQERRD LASRFGFAPA SIALPGGFTQ
RSIRPVNQRY AHISAWISSV GSAVALNDLD GDGLSNDLCY VDVRTDQVVV SPAPVAGQAP
RYEPFALSTG SLPVDDVMAP MGCVPGDFNE DGRVDLLVYL WGRTPVLHLA RADATALAQE
AYEPVELVPG NGSGTYDGPR WNSNSATVAD FDGDGHDDVH IGNYFPDGPV LDPAQSTGVE
MNASMSSALN GGEDHVLRWT GGSAGDRPTA SFEFAEGVIP DEASRGWALA SGSNDLDGDL
LPELYLAHDF GPDRLLHNES TPGAIRFRIA EGSRGPLEPK SKNVGQDSFK GMGVDFGDLN
GDGVYDMYVS NITTSFGIEE SHFAFLSTTG DRSEVARELG AGRAVWEDES APLHVAWSGW
GWDVKLADFD NSGGLEIAQA TGFVKGQVNR WPQLQELATA NDALLANPLW WPAVGPGDDV
GGHQRFAFFA RTGDEGFFSD LSHELGLDVP VPTRGIATGD VDGDGRLDMA VSRQWEDPVF
YRNTSQRAGN FLGLRLTHEG QRPESGFPGA GSPVIGAQVE VTTASGRVLV NRVDGGSGHS
GKRGHEVHFG LGEDDRAVRA RISWRDRTGQ AHEQELSLEP GWHDLRLGER VEEGE
|
|---|
| |