| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4116 |
|---|
| Symbol | |
|---|
| ID | 8328309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4835663 |
|---|
| End bp | 4836493 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644944580 |
|---|
| Product | p-hydroxycinnamoyl CoA hydratase/lyase |
|---|
| Protein accession | YP_003101817 |
|---|
| Protein GI | 256378157 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGC TGGAAACCGT GAACGTCGAG ATCGACGGGC CCAGGGCCAC GATTTACCTG
AACCGCCCGG ACAAGAAGAA CGCCATGAAC CCCCAGATGC ACGGGGACAT GAACCGGGCG
CTGGACGCCA TCGAGGAAGC GGGCACCGTC AAAGCCGTCG TCGTCACCGG CAACGGCGAC
AGCTTCAGCT CGGGAATGGA CCTGGAGGAG TGCTTCCTGC GCCCGTTCGA CGACCCGCAG
CTGTTCCACC GCACCAACCT GGTCGCGCTG ACCTGGTTCA AGCGCCTCAA GGCGTTCCCG
GCGGTGACCA TCGCCAAGGT CAACGGCTTC GCCTTCGGCG GCGGGTTCCT GGTGACCGGG
CTGTGCGACC TCGCCGTGGC CTCGGAGACC GCGCTGATCG GCCTCTCCGA GATCAACTTC
GGGATCTTCC CGGCGGGCGG CGCGACCTGG GCCGCGACCC ACAACCTGGC CCGCAAGCAG
GCCCTGTACT ACATCCTCAC CGGTGAGGCG ATGACCGGCA AGGACGCCGA GCGGCACGGG
CTGGTCAACC GCGCGGTGCC CGCCGACCAG CTGGACGCGG CCACCGACGA GCTGGTCGGC
AAGATCGTCA AGAAGAACCC GATCACGCTC CAGCTCGCCA AGCAGGTCTA CGAGGGCACC
ACGCGGCTCG ACCTGCCCGC CGCCATCGAC TACGACCAGG CCAAGCTGTG GGAGCTGTCC
CGCCTGAGCG GCAACGAGTG GATCAACGTC GCGCTGCGCC AGTTCGAGAA GCGCAGCTAC
CAGCCCGGCC TGAGCACCTA CGAGCGCGGC GAGAAGGACG CCGTCCGATG A
|
|---|
| Protein sequence | MITLETVNVE IDGPRATIYL NRPDKKNAMN PQMHGDMNRA LDAIEEAGTV KAVVVTGNGD
SFSSGMDLEE CFLRPFDDPQ LFHRTNLVAL TWFKRLKAFP AVTIAKVNGF AFGGGFLVTG
LCDLAVASET ALIGLSEINF GIFPAGGATW AATHNLARKQ ALYYILTGEA MTGKDAERHG
LVNRAVPADQ LDAATDELVG KIVKKNPITL QLAKQVYEGT TRLDLPAAID YDQAKLWELS
RLSGNEWINV ALRQFEKRSY QPGLSTYERG EKDAVR
|
|---|
| |