Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4108 |
Symbol | |
ID | 8328301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4826774 |
End bp | 4827343 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644944572 |
Product | regulatory protein TetR |
Protein accession | YP_003101809 |
Protein GI | 256378149 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCCTG GGATGCCTCA CCTGCGCTCG GACGCGCTGG ACAACCGCGA CCGCGTCCTG GCCACCGCGC GCGCCCTGTT CGCCGAGCGC GGCCTGGCCG TGGGGGTCCG GGAGATCGCC CGCGCGGCCG GGGTGGGCCC GGCGACCCTG TACCGCCGGT TCCCCACCAA GCAGGCGCTC GTGGAGGCGG CGTTCAGCCT GGAGATGGCG GACTGCGAGC GGATCGTCGT GGAGGCCTGC GCCGTCGAGG ACCCGTGGGA GGGGCTGGTC TCGGCGCTGC GGGAGCTGAT CCTGCTCACC ACCCGGAACC TCGGTTTCGT CGTCTCCTTC GCCCCGGACG AGGAGACCGG CGAGGCGATC ACCGCGCAGC GGCGCGCGCT GCACCGGATG CTCGCCGACC TGGCCCGCCG GGCGCAGGCG GCCGGGCGGC TGCGGCCCGA CGTGGGCGTG GACGACCTGG TGCTGCTCCT GCGGGCCGGT CGTGGCCTGG CGGCGGGCGG TCCCGAGGCC GGGGGCGCCG ACGCGCGCCG GTTCGCCGCG CTCGCGCTCG ACGCGCTCCG GGCGCGCTGA
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Protein sequence | MAPGMPHLRS DALDNRDRVL ATARALFAER GLAVGVREIA RAAGVGPATL YRRFPTKQAL VEAAFSLEMA DCERIVVEAC AVEDPWEGLV SALRELILLT TRNLGFVVSF APDEETGEAI TAQRRALHRM LADLARRAQA AGRLRPDVGV DDLVLLLRAG RGLAAGGPEA GGADARRFAA LALDALRAR
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