Gene Amir_4108 details

Gene Information

• Locus tag: Amir_4108
• ID: 8328301
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 4826774
• End bp: 4827343
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 644944572
• Product: regulatory protein TetR
• Protein accession: YP_003101809
• Protein GI: 256378149

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCCTG GGATGCCTCA CCTGCGCTCG GACGCGCTGG ACAACCGCGA CCGCGTCCTG 
GCCACCGCGC GCGCCCTGTT CGCCGAGCGC GGCCTGGCCG TGGGGGTCCG GGAGATCGCC 
CGCGCGGCCG GGGTGGGCCC GGCGACCCTG TACCGCCGGT TCCCCACCAA GCAGGCGCTC 
GTGGAGGCGG CGTTCAGCCT GGAGATGGCG GACTGCGAGC GGATCGTCGT GGAGGCCTGC 
GCCGTCGAGG ACCCGTGGGA GGGGCTGGTC TCGGCGCTGC GGGAGCTGAT CCTGCTCACC 
ACCCGGAACC TCGGTTTCGT CGTCTCCTTC GCCCCGGACG AGGAGACCGG CGAGGCGATC 
ACCGCGCAGC GGCGCGCGCT GCACCGGATG CTCGCCGACC TGGCCCGCCG GGCGCAGGCG 
GCCGGGCGGC TGCGGCCCGA CGTGGGCGTG GACGACCTGG TGCTGCTCCT GCGGGCCGGT 
CGTGGCCTGG CGGCGGGCGG TCCCGAGGCC GGGGGCGCCG ACGCGCGCCG GTTCGCCGCG 
CTCGCGCTCG ACGCGCTCCG GGCGCGCTGA 

 

Protein sequence

MAPGMPHLRS DALDNRDRVL ATARALFAER GLAVGVREIA RAAGVGPATL YRRFPTKQAL 
VEAAFSLEMA DCERIVVEAC AVEDPWEGLV SALRELILLT TRNLGFVVSF APDEETGEAI 
TAQRRALHRM LADLARRAQA AGRLRPDVGV DDLVLLLRAG RGLAAGGPEA GGADARRFAA 
LALDALRAR