Gene Amir_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4087 
Symbol 
ID8328280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4802988 
End bp4803509 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content75% 
IMG OID644944552 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003101789 
Protein GI256378129 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCAAGG ACACGAGGTC GGACTGCCCG GTGAACCTGG CGCTGGAGAT CTTCGGCGAC 
CGGTGGACCC TGCTGGTGCT GCGCGACGTG ATCTTCCTGG GGGCGCGGCA CTTCCGCGAG
CTGCTCGCCG GACCCGAGCG GATCTCCTCG AACATCCTCG CCGACCGGCT CGCCGTGCTG
GTCGAGCACG GGATGCTCAC CAAGACCGAC GACCCCACGC ACAAGCAGAA GGTCGTCTAC
AGCCTCACCG AGCGCTCGAT CGCCCTGGTG CCGGTGTTCG CGCAGCTGGG CATCTGGGGC
GTGCGGCACC TGCCCGCCGG CGACGAGCAC GCCGCGCGCA CGGCGGTGCT CGCCGCGGGC
GGGCCCGCGC TGTGGGCCGA GTTCATGGAC GAGCTGCGCG AGGCCCACCT GGGGCCGCAC
GCGCGGCTGG CCCCGCCGGG GCCCGGCCCC TCGGTGACCG AGCGGCTGGC CCCGGCGAGC
CTGGCGGCGC TGGTGGCCGC CGGGGTTCAC CGCGAGGCGT AG
 
Protein sequence
MRKDTRSDCP VNLALEIFGD RWTLLVLRDV IFLGARHFRE LLAGPERISS NILADRLAVL 
VEHGMLTKTD DPTHKQKVVY SLTERSIALV PVFAQLGIWG VRHLPAGDEH AARTAVLAAG
GPALWAEFMD ELREAHLGPH ARLAPPGPGP SVTERLAPAS LAALVAAGVH REA