Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4087 |
Symbol | |
ID | 8328280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4802988 |
End bp | 4803509 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644944552 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003101789 |
Protein GI | 256378129 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCAAGG ACACGAGGTC GGACTGCCCG GTGAACCTGG CGCTGGAGAT CTTCGGCGAC CGGTGGACCC TGCTGGTGCT GCGCGACGTG ATCTTCCTGG GGGCGCGGCA CTTCCGCGAG CTGCTCGCCG GACCCGAGCG GATCTCCTCG AACATCCTCG CCGACCGGCT CGCCGTGCTG GTCGAGCACG GGATGCTCAC CAAGACCGAC GACCCCACGC ACAAGCAGAA GGTCGTCTAC AGCCTCACCG AGCGCTCGAT CGCCCTGGTG CCGGTGTTCG CGCAGCTGGG CATCTGGGGC GTGCGGCACC TGCCCGCCGG CGACGAGCAC GCCGCGCGCA CGGCGGTGCT CGCCGCGGGC GGGCCCGCGC TGTGGGCCGA GTTCATGGAC GAGCTGCGCG AGGCCCACCT GGGGCCGCAC GCGCGGCTGG CCCCGCCGGG GCCCGGCCCC TCGGTGACCG AGCGGCTGGC CCCGGCGAGC CTGGCGGCGC TGGTGGCCGC CGGGGTTCAC CGCGAGGCGT AG
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Protein sequence | MRKDTRSDCP VNLALEIFGD RWTLLVLRDV IFLGARHFRE LLAGPERISS NILADRLAVL VEHGMLTKTD DPTHKQKVVY SLTERSIALV PVFAQLGIWG VRHLPAGDEH AARTAVLAAG GPALWAEFMD ELREAHLGPH ARLAPPGPGP SVTERLAPAS LAALVAAGVH REA
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