Gene Amir_4058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4058 
Symbol 
ID8328251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4769121 
End bp4769897 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content77% 
IMG OID644944528 
Productbeta-lactamase domain protein 
Protein accessionYP_003101765 
Protein GI256378105 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.966002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGGTCC ACCACCTCAA CTGCGGCACG ATGCGCCTGC CGGGCGCGCG CGTCGTGACG 
CACGTGCTGC TGCTGGAGAC GCCGACCGGA CTGGCCCTGG TGGACACCGG GTACGGCGTC
GCCGACATCG CCGCGCCCGC CCGGCGGCTC GGCGCGTACC GGCACGTCGT CCGGCCGGTC
CTGGACCGGG CCGAGACCGC CGTCGAGCAG GTGCGCGGGC TCGGGTTCGC GCCCGAGGAC
GTGCGCGACG TCGTGGTCAC CCACTTCGAC ACCGACCACG TCGGCGGGCT CGCGGACTTC
CCCTGGGCGC GGGTGCACGT GACCGCGACC GAGTGGGAGG CCGCCTCCCG GCCGCGCACC
GCGCTGGAGC GGGCGCGCTA CCGGTCGGCG CAGTGGGAGC ACGGGCCGCA GATCGCGGCG
CACGGGCCTG GCGGCGAGTC CTGGCGCGGG TTCGCGGCGG CTCGGGAGCT GACCGACGTG
GCGCCCGGCG TGGTGCTCGT GCCGCTTCCG GGGCACACCA GGGGGCACGC GGCGGTGGCC
GTGGACGCCG GTTCCCGCTG GGTGCTGCAC GCCGGTGACG CCTTCTACGA CCTCCGGGCG
CTGACCGGCG GGGTGAAGCC GCCAGCGGCG CTGCGGGCGC AGGAGCGGGC CGTCGCCCAC
GACCGCGGGT CGCTGCGCGC CAACCAGGAG CGGTTGGCCG AACTGCACCG TCAGGGTCAG
CAGGACCTGC TGCTGGTCAA CGCGCACGAC CCGGCGCCGC TGGCCGCCGC CCGCTGA
 
Protein sequence
MRVHHLNCGT MRLPGARVVT HVLLLETPTG LALVDTGYGV ADIAAPARRL GAYRHVVRPV 
LDRAETAVEQ VRGLGFAPED VRDVVVTHFD TDHVGGLADF PWARVHVTAT EWEAASRPRT
ALERARYRSA QWEHGPQIAA HGPGGESWRG FAAARELTDV APGVVLVPLP GHTRGHAAVA
VDAGSRWVLH AGDAFYDLRA LTGGVKPPAA LRAQERAVAH DRGSLRANQE RLAELHRQGQ
QDLLLVNAHD PAPLAAAR