Gene Amir_4044 details

Gene Information

• Locus tag: Amir_4044
• ID: 8328237
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 4753130
• End bp: 4755073
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 644944514
• Product: Na-Ca exchanger/integrin-beta4
• Protein accession: YP_003101751
• Protein GI: 256378091

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGTCG CCAGGTCCTC GTTCGGACCT CCCCCGCTTT TCCGCCCCGG TTCCGGGAAG 
CGCAGACCGG TCCGCAGGAC AGCGGTTCTC GCGTTAGCCC TGTGGGCCGC GACGACGACC 
GCCGTCAGCG CAGCGCCGCC CGCCTCCGCG CAGGTCGACC CCGCCGACGT CGAGGTGGTG 
CTCGGCCCCG GCCAGAGCGC CCAGGTCGCG AAGAAGGTCA CCACCCCGGC CGTGCCGCCG 
AAGCCGGACC TGGTGCTGCT CGCCGACACC ACCGGCAGCA TGGGCGCGGC GATCGCGAGC 
GTGCGCGCGA ACGCCGACGC GGTCACCGGG CAGGTCCTGT CCGCGCAGCC CGCCGCGCAG 
TTCGCGGTGG CCGAGTACCG GGACACCGGG GACGCGTTCG CGTTCCGCGT CGACCAGGCG 
CTGACCGCCG ACCGGGACGC GGTGCGCGCG GGCATCGGCC GGTGGAGCGC GTCCGGCGGC 
GGCGACACCC CCGAGTCCGC GATCAACGCG CTCCACCAGA TCGGGCAGGG CGCGACGGGC 
TTCCGGCCGG ACAGCACGCG CATCGTCGCG TGGTTCGGCG ACGCGCCCTC GCACGACCCG 
GTGCTCGGCC GGTCCCTGTC GGACGCGATC GGCGCGCTGC GCTCGGCGGG CGTGCGGGTG 
GTCGCGGTCA ACGTGGCGGG CGCGGGCAGC GGGCTGGACG CGGGCGGGCA GGCCAGCCGG 
ATCACGCGGG AGACCGGGGG CGTGCTGCTC AACCAGGTGC CGCCGGACCA GGTGGCGAGG 
GCGATCCTGG ACGGCGTGCG CGAGGTGCCG GTGACCGTGA CGCCGAGGAC GACCTCGTGC 
GACGCGCGGC TGTCGGTGCG CAACGAGCCG TCGTCGCGGA CGGTGACCAG CGGGGCCAAG 
GCCGAGTTCG CCGAGACCGT CGAGGTGAAG CCGGGCACGC CCGCGGGCAC CTACCACTGC 
ACGGTGGACT ACCAGGTGGA CGGTCGCTCG CTCGGGTTCG TGGAGCGCAC CAAGGTGCAC 
GTGCCGGGCG TGCGGGTGGG CGACGCGACC GCGTCCGAGG GCGACGGGCA GGCGGTGTTC 
ACCGTGTCGC TGGACCGGCC GAGCCCGAAG CCGGTGACGC TGCGGGCGTC CACCTCGGAC 
GGTTCGGCGG TCGCGCCCGG CGACTACGCG GCGACCTCGC AGGTGCTGAC GTTCGCGCCC 
GGTGAGACGA CGAAGGCGGT CGCGGTGCCG CTGGTGTCCG ACACCGTGGA CGAGCTGGAC 
GAGACGTTCG CGCTGCGGCT GGGCGAGGTC GCGGGCGCGG CGGTGTCCGA CGGCGAGGGC 
GTGGGCACGA TCCTGGACGA CGACCGCGAC GGCGTGTTCA CCTGCCGGGC GAGCGTGGCG 
AACGTGGCCG GGATCGAGCC GGTGGTGGCG AACCCGCCGA ACGCGCCGTG CGCCGAGGCC 
GACCAGACCA CGCTGCAGGC GAACCTGGGC TCGGGGCTGC TGAACGCGCG CCTCAAGGCC 
CTGTCGGCGC GCACGGACCA GACGCCGGAC GACCCGTCGG CGAGCCGGGC GGCCGAGGGC 
GACTCGGTGG TGTCACGGGC GCTGGTGGAG ACGACGACGC TGAGCACGCT CGGGGTGAGC 
GTGGAGCTGG GCGTGATCCG GTCGGAGGCG TCGGTGACCT GCGTGGCGGG CGGGCACGGG 
CTGGAGCCGA GGTTCTCCGG CGGGTCGACG ATCGACTCGC TGAAGGTCAA CGGGGTCCCG 
GTGACTGTGG TGGGCTCGCA GCCGGTGACG ATCCCGCTGG TGGTCGGCTC GCTGCGGCTC 
AACAGCACCG AGCGCACGGC GGACGGGCTG GTGCAGCGGG CGGTGGTGCT GGACGCGCTG 
CTGGTCAAGG TCGTGGTGGG CGAGGCGAGG GTGGGCTACC GGGGCACCGA CGCGCACCCC 
GGCGGCAACC CCTGCCAGGG CTAG 

 

Protein sequence

MPVARSSFGP PPLFRPGSGK RRPVRRTAVL ALALWAATTT AVSAAPPASA QVDPADVEVV 
LGPGQSAQVA KKVTTPAVPP KPDLVLLADT TGSMGAAIAS VRANADAVTG QVLSAQPAAQ 
FAVAEYRDTG DAFAFRVDQA LTADRDAVRA GIGRWSASGG GDTPESAINA LHQIGQGATG 
FRPDSTRIVA WFGDAPSHDP VLGRSLSDAI GALRSAGVRV VAVNVAGAGS GLDAGGQASR 
ITRETGGVLL NQVPPDQVAR AILDGVREVP VTVTPRTTSC DARLSVRNEP SSRTVTSGAK 
AEFAETVEVK PGTPAGTYHC TVDYQVDGRS LGFVERTKVH VPGVRVGDAT ASEGDGQAVF 
TVSLDRPSPK PVTLRASTSD GSAVAPGDYA ATSQVLTFAP GETTKAVAVP LVSDTVDELD 
ETFALRLGEV AGAAVSDGEG VGTILDDDRD GVFTCRASVA NVAGIEPVVA NPPNAPCAEA 
DQTTLQANLG SGLLNARLKA LSARTDQTPD DPSASRAAEG DSVVSRALVE TTTLSTLGVS 
VELGVIRSEA SVTCVAGGHG LEPRFSGGST IDSLKVNGVP VTVVGSQPVT IPLVVGSLRL 
NSTERTADGL VQRAVVLDAL LVKVVVGEAR VGYRGTDAHP GGNPCQG