| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4042 |
|---|
| Symbol | |
|---|
| ID | 8328235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4751173 |
|---|
| End bp | 4752312 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644944513 |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_003101750 |
|---|
| Protein GI | 256378090 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCACC CTCCCGGCGA CGCCGTCACC TCCGTCGCCC TGTCGCTGGT GAACCTGCCG
CTGCCCGTCC CGGTCAGCGA CGCGAAGGTC CTGACCGGCA GGCAGAAGCC GCTCACGTCG
GTGGCGCTCC TGTTCGCCGA GATCACCGCC GAGTCCGGGC TGACCGGGTT GGGCCTGGCG
TACTCCAAGC GCGCGGGAGG CCCCGCTCTG TACGCGCACG CCGCCGAGAT CGCCCCCGAG
CTGATCGGCG AGGACCCCAG CGACGTGGAC CGGTTGTGGC GCAAGCTGTC CTGGGCGGGC
GCGTCGGTCG GCCGGGGCGG GCTGGCCGGG CAGGCGATCG CCGCGTTCGA CATCGCCCTG
TGGGACCTCA AGGCCAAGCG CGCGACCCTG CCGCTGGCCA AGCTCATCGG CGCCCACCGC
GACGCCGTGC CCTGCTACAA CACCTCCGGC GGGTTCCTGT CCGCGCCGCT GGAGCAGGTG
CTGGACAACG TCGACCTCGC GCGCTCGCGC GGCATCGGCG GCGTCAAGGT CAAGGTCGGC
CACCCCGACC CCGCGCAGGA CCTCGAGCGG GTCGCGGCCG TGCGCGAGCA CCTCGGCGAC
GGCGTCCCGC TCATGGTCGA CGCCAACCAG CAGTGGGACC GCGCCCGCGC CGCGCGGGTC
TGCCGCGAGC TGGAGCGGTT CGACCTCACC TGGATCGAGG AGCCGCTCGA CGCGCACGAC
ACCGCAGGGC ACGCCGCCCT CGCCGCCGCG CTGGACACCC CGGTCGCCAC CGGCGAGATG
CTCACCTCCG TCGCCGAGCA CTGGGCGCTG ATCACCGGCG GCGCCACCGA CTTCCTCCAG
CCCGACGCAC CCAGGATCGG CGGCGTCACC CCGTTCCTGC GCGTCGCCGC GCTCGCCGAC
CAGCACCACC TCGCGCTGGC CCCGCACTTC GTGATGGAGG TCCACCTGCA CCTGGCCGCC
GCCTACCCCG GAACCGCGTG GGTGGAGCAC TTCGAGTGGC TGGAGCCGCT GTTCCACGAG
CGCGCCGAGG TCGTCGACGG CCGGATGCTG GTCCCGGACC GGCCGGGCCT GGGGCTCACG
CTCACCGAGC AGGCTCGCGC GTGGACGGTC CGGCACGCCA CCGTCACCGG TCCGCAGTGA
|
|---|
| Protein sequence | MPHPPGDAVT SVALSLVNLP LPVPVSDAKV LTGRQKPLTS VALLFAEITA ESGLTGLGLA
YSKRAGGPAL YAHAAEIAPE LIGEDPSDVD RLWRKLSWAG ASVGRGGLAG QAIAAFDIAL
WDLKAKRATL PLAKLIGAHR DAVPCYNTSG GFLSAPLEQV LDNVDLARSR GIGGVKVKVG
HPDPAQDLER VAAVREHLGD GVPLMVDANQ QWDRARAARV CRELERFDLT WIEEPLDAHD
TAGHAALAAA LDTPVATGEM LTSVAEHWAL ITGGATDFLQ PDAPRIGGVT PFLRVAALAD
QHHLALAPHF VMEVHLHLAA AYPGTAWVEH FEWLEPLFHE RAEVVDGRML VPDRPGLGLT
LTEQARAWTV RHATVTGPQ
|
|---|
| |