Gene Amir_4041 details

Gene Information

• Locus tag: Amir_4041
• ID: 8328234
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 4746067
• End bp: 4751058
• Gene Length: 4992 bp
• Protein Length: 1663 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 644944512
• Product: hypothetical protein
• Protein accession: YP_003101749
• Protein GI: 256378089

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACGAGG CACATCCCGA CGCCGGGCTC ATCGCCGCGG GCGCGGTGCT CCCCGGTCGG 
CGCCCCGCCG CGCCGGGGCA GGACGCGATC ACGGCCAGGC GCTACGCGCA CCCGGCCGTC 
CCCGGTCGCG CCGTGGTCCG GCTCGTCCCC GCCCTCCTCG CCCGCGCCGA GGACCTGACC 
TGCGACTACC TCGGCTTCGG GGAGCCCGAC CGGGTCCGCG AGGTCGGCAC CGGCAAGCGC 
GTCGCGCTCG GCTTCCCCGC CTGGGCGCTG GCCAACGACC CGGACAACGG GCACCACGCG 
CTCGACCTGG TCAAGGACGT CGAGCGGCTC GGCGCGCTGG CCCGCTCGCG CGCCGAGGCG 
GCCAAGACCG GGTTCCTCGC GCTCGGCGAG CGGCTCGCCC GGTCCGCCCC GCACTTCCTG 
CCCACCCTGT ACGAGCAGGC CGGGCGCGCG TTCCTGGCGC ACGGCAGCAC CAGCTACGCG 
GGCGCCATGT TCGGCAGGGC GCGGCAGGCC GAGGAGGTGC ACGACCTCCC GCTGGACGTC 
GAGCGGCTGC GCGAGGTGTT CCTGGAGTTC GCGTTCGCGG GCGCGCTCAC CGTGAAGGCG 
CTGACCTCGT TCACCAAGTC GCTGCAGGGC AGGCTCGACC CGGTCGAGGC CTACGAGCTG 
GTGCTCCACC TGTGCGTGCG GCGCTGCGCG GGCGGCCTGG CCCCGCACAA CTCCATGCCG 
GACGACCTGC GCAGGCTCGC CACCGCCGCC GGGCTCGACC CGGACGCCGA GGACGAGCGG 
CTGCTCGCCC GTCTGCTCGG CCTGCGCGGC GTCTCCCGCG CGGGCGGAAA GTTCTGGAAG 
CGCTACCGCC CGGCCCTGCT GCGGCTGTCC ACGAAGGACC CGGCGCTCGC GCCCCGGCTG 
CTGGAGCTCC TCCCGGACGA CCGCGACGAC CTGGACGACT GGCTCGACCT GCTGGAGGCG 
TGCGGGGCGA CCGCGCACCT GGTCGACGGC ACCGGGACGG TCGGCGCGGC GGCCTGGCTG 
ACGTCGGCGG TCCAGCTGCG CGACCTCTCC TGGGGCGGCG ACACCCCGCG CTCCGAGCGC 
CTGCTGGACC TGGTCGCCCG CCTCGCGCCC CGGCTGACCG CCGACGCCGT CCCGGTCCGC 
TTCCCGCACA CCTGGCGGCA GGGCGAGCTC GACCTGCTCG ACCTGCTGCT CGCCCTGGAC 
GTCCCGTTCG AGCTGACCGA GGAGACGGGG GAGCGGCGCA ACTTCTCCGT CGACTCCTGG 
CTCGCCGACG AGCTGCCCGG CCGCCGCGAC CTGGTCGCCC TCGCCACCTC CGACCGCACC 
CTGGCCCACC TGGGCGCCGG GCTGGTCCAG CACCTGTCCA ACGCGGGCTC CTCGGGCCTG 
GCCAACCCGG CGGCGGTGCG CGCGGCGATG GCCGTGCCGG GGCTGCGCTC CGCGCTGTCG 
GCGTGGCTGG CCGCGCGCGT CACCGCGCTC GGCGCCACCG GTCTGCCCGA CCTGGAGCGG 
CACCTGGCCG AGCTGGGGCC GCTGCGCGTG CCCGAGGCGT TCGCCGTGCT CCCCGAGGCC 
GCCGAGACCA TCGCGGACGC CGACGTCGCC ACCCTGCTCG CCTCGGTGCT GCGCACCGGA 
CTGCTGGACG AGCTGGGCTG GCCCGCGCTG GACCGCGCGG CCGGGCTGCT CGGCGCGGAG 
GCCGAGATCG CGGGCGAGGG CTGGCCCGCG CTGGTGCTGC GCGCGGGCGA GGAGTTCGCC 
GTGGCCGGGC CGGACGGGCT GCTGGCCGAG CACCGCTCCC GCGTGCCGCT GGAGCGCAGG 
CACGACTGGG ACTACGCGCC GACCGCCTGG TGGTTCGACG GCCGCCTGCT GGTGCGCTGG 
CACGCCAACT ACGGCGAGGA GCTGGCGTAC TGGAGCGACG CGCCGACGGT GCTGTTCGAC 
CCGCTCAGCG GGGTCGACCC GTACCGCGAC CGCGCGGCCG TCCCGTCCCT CGCCCTGCCC 
GGAGGGGCCC GCTGCACCGG CGGTCGCGCG GTCAGTCCCG GCGACACCCA CGCGCCCTTC 
CCACGCCCGG TGCACGGCGA CGGCGTCACC CTGTGGGTCG ACACCGACGC GGGCTGGCGC 
GAGGTCGACC CGGCCACCGG CGACCTGGGG CGGTCGAGCC TGCCGACCTT CCTGGAGGAG 
TTCGGCGCGA AGCGCGAGCT GGACGACTGC CACCTGCGCC CGGTCGCCCC TGGGACGGCG 
GCGAGCCCGC TCGGCGCGTC CGGTGGGCTG CACGGCTGGC GGGTGCGCGC CGAACCGGAC 
GGGTCCTGGT CGGGCGAGGG CGTGGACGGA CGCGTGGTGC GGCAGCCGCG CGAGGCCGGT 
GCTCCCTCGG GGCTGCTGGA CCTGCCCGGT GGCGCGCGGC TGGTGGTGCG CGCCGAGTAC 
GAGACGATCG AGCTGCGCGA CACCTCGGGC GCGCTGCTGG CGAGCTTCGA CGTGGGCGAG 
CGCCGCCCCC AGGGCGCCTC GGGCACCCCG CTGGTGCCGC CGGTCGCGTG GTGGCACGCG 
CTGCGGCCCC GCGACGAGGC CGGTTCCGCC GCGCTGCGGG CGGTCACCGA GGAGGACGCG 
CGCGAGCTGA TCACCGCCGC GCTGGCGACG GCCGAGAGCA CGCTGCCCGC CGTCATCGCG 
GCGGAGGTGG CGCTGCTGCG CACGAGCGGG GATGGCGCGG GCGCTGAGGA CTCCGGCGCA 
GGGGAGTCGG GCGCAGGGGA GTTGAGCGCA GGGGAGTCGG ACGCCCATTC GTCTTCGGCC 
GCCGGTACCG GTGCGGGTGC GCAGCCGGGG CAGCCGGGCG GAACGTCCCC TTCGGACCCC 
GCGACCGGTG GCCCGATCGC CGCTCCCGGT GACCCGACCG CCGGGCGGTT CACGGCGCTG 
GCCCGCGTGG TCGCCGCGCG GCTGCCCGCG CTGACGCACC CCGAGCTGCT CATCGCCGTG 
GTCGCCGAGG TCCGCAGGGC CGCGCGCCTC CAGAAGGGCT TCCGGGCGTT CGCGCGGGTC 
GCCGAGGCGG CCAGGCTGAT CGACGAGACC GCGCGCCCCA CCGCGCCCGA GTCCGCCGCG 
CTCACCGACA CCGGCATCAA CACGTCGGTC AACTGGTTCG CCTCCCACAC CGACGACGAC 
GTGTCCGGGC CGCCGTCCGC GCTCCCCGAC CTGATCGCGG CGCTGGTCGC GGCCTCGGTC 
GACCCGGTGC CCGGACCGCT GCCCGAGGTG TCCTCACCGG ACTGGGTCAG GGTGATCCCG 
CACCTGCGCT CCCTCGTGCA CCGGGCCGCC TCGCCGTTCA CCCCGCCGGG GCAGCGCGCC 
GCGCTGGCCG AGCTGCTGCG GGTGCTGGCG TCCAGCCCGA TCGCGGACGG CTCCGGCCGG 
TGGCGGTCGG TGGAGCTGGT GCTGCCCGAG CGCGGCCCCG ACCCGGAGAA CCGGGTGGCG 
CCGACCGGCG ACGGGTTCGT CGCCCTGTTC GAGGAGAGCT GGCTGGACGT GCCCGGCCGC 
AGCTTCGAGG GCCTGCAGTT CGGCCGCGAC GGGTTCGCGC TGCCTGAGGG CTGGCGGCTC 
AGCGAGCACT GGCCGCTCGA CCCCGGCATC GACCGGGACG CCGTGCTGGC GTTCCTGGAC 
GCGCTGGCCG AGCGCGGTCC CGCGCCGTGG CGGCCGGAGG CGGTCGACCG GCTGGTGGAG 
CGCACCGGCC TCAGCGGCCC CGAGGCGACC GTGCTGCTGG CCGGGATGCC GGGCGTGGGC 
GCGTGGGGCG GCAACTACCT GGGCACCGCG CTGCGCAAGG AGCTGGGCCT GTCCCGCGAC 
GCCGCGCTCG TCGCCAAGGC CACCCTGGGC CCGCTGGAGG ACGACGAGCG GGGCCAGCTC 
CTCAACGCCG CCGTGCCCGC CGACCCGCTG CGCCTGTGGA CCGAGGGCCC GGACGTGGAC 
GCGGTGGCCG AGGAGTGGAA CACCGCGCAC GGCCGCCGCA CCCCGGTGCC GGAGGACCTG 
CTGATCGCGG CGCACAAGGC GTTCAGCCGC GACGACATCG CCGCCCTGCT CGTCGGCCTG 
GCCAACCCGG ACCGCGCGTC CTGGCTGACC ACCGACGGCG GCCAGCGCTT CAGCGGGATC 
GAGCTGGAGC AGGGCGACGA GGCCGGGTTT GACTCGGACC ACCTGGACGT CCTGCCCCGG 
TTGCTGGCCT GGCTCGGCTA CCACCTGCCC GGCGGTTCGC CGCTGCGCGT GGAGCTGTCC 
CGCGCGCTCG AACTGGCCAG GGCGCGGGCG AGCTCGCCCG CGTTCCTGGT GGAGCTGGGC 
GCCTGGGAGG AGGTGCGGAA GGTCAGGAAG CTGCTCGGCG TGCCCGCCCT CGAATCGGGC 
AAGGTGCTGG TGCACCGGGG TTTCGTGGAG GTGGCCGCGG AGGACGACTA CTGCACGGTC 
GCGGTCCGGC CGGGCCTGGT CGGGCAGGCG GACCGGGACC TGCTGGTGGC GCTGGCGAAG 
GCGCTCGACG GCGAGGCGGT CCTGAACGAC CTGGACCTGC TGCGCTCGGA CGGCCTGGCG 
GCCCTGTGCG CCCCGACCGC GGGCGCCCAG GACCCGTCGG CGCACGCCCA GGACCCGAAC 
AACTCGGTCC CGCACCTGGT GGCGGAGGTG GCGCGGGCGC TGTCCCTCTC ACCCGACGCG 
GCGACCCTGT ACCTCCAGCT GCTCGCCCTG CCCGACCCGA CCGACGCCAA CGCGGCCCGC 
TGGACCGGTT GGAAGCCCAC GCGCCTGCGC AAGGCGAGGG CCGAGCTGGC CGGGACCGAC 
CTGGTGCTGA CCGCGAAGCG CGCCAGGTCG GGCCGAACCC TGTTCCTGCC GGGCGGCTGG 
CGCGACCTGC CCGCGCCCGC CCTGCCGGTG GAGACCTGGA AGGAACGCCT GTACCCGCTG 
CCGGTCCACC CGGAGGGCCC GGTGCTCCCC GCCGAGCCGG TGGCGGACCT GTTCGCCAGG 
GCGTGGGCGG AGGTCCGGGC AGGCGCGGTC CCCGCCTACG AGAAGCTGGG CGGAGAGAGG 
GGCCGCCGCT GA 

 

Protein sequence

MDEAHPDAGL IAAGAVLPGR RPAAPGQDAI TARRYAHPAV PGRAVVRLVP ALLARAEDLT 
CDYLGFGEPD RVREVGTGKR VALGFPAWAL ANDPDNGHHA LDLVKDVERL GALARSRAEA 
AKTGFLALGE RLARSAPHFL PTLYEQAGRA FLAHGSTSYA GAMFGRARQA EEVHDLPLDV 
ERLREVFLEF AFAGALTVKA LTSFTKSLQG RLDPVEAYEL VLHLCVRRCA GGLAPHNSMP 
DDLRRLATAA GLDPDAEDER LLARLLGLRG VSRAGGKFWK RYRPALLRLS TKDPALAPRL 
LELLPDDRDD LDDWLDLLEA CGATAHLVDG TGTVGAAAWL TSAVQLRDLS WGGDTPRSER 
LLDLVARLAP RLTADAVPVR FPHTWRQGEL DLLDLLLALD VPFELTEETG ERRNFSVDSW 
LADELPGRRD LVALATSDRT LAHLGAGLVQ HLSNAGSSGL ANPAAVRAAM AVPGLRSALS 
AWLAARVTAL GATGLPDLER HLAELGPLRV PEAFAVLPEA AETIADADVA TLLASVLRTG 
LLDELGWPAL DRAAGLLGAE AEIAGEGWPA LVLRAGEEFA VAGPDGLLAE HRSRVPLERR 
HDWDYAPTAW WFDGRLLVRW HANYGEELAY WSDAPTVLFD PLSGVDPYRD RAAVPSLALP 
GGARCTGGRA VSPGDTHAPF PRPVHGDGVT LWVDTDAGWR EVDPATGDLG RSSLPTFLEE 
FGAKRELDDC HLRPVAPGTA ASPLGASGGL HGWRVRAEPD GSWSGEGVDG RVVRQPREAG 
APSGLLDLPG GARLVVRAEY ETIELRDTSG ALLASFDVGE RRPQGASGTP LVPPVAWWHA 
LRPRDEAGSA ALRAVTEEDA RELITAALAT AESTLPAVIA AEVALLRTSG DGAGAEDSGA 
GESGAGELSA GESDAHSSSA AGTGAGAQPG QPGGTSPSDP ATGGPIAAPG DPTAGRFTAL 
ARVVAARLPA LTHPELLIAV VAEVRRAARL QKGFRAFARV AEAARLIDET ARPTAPESAA 
LTDTGINTSV NWFASHTDDD VSGPPSALPD LIAALVAASV DPVPGPLPEV SSPDWVRVIP 
HLRSLVHRAA SPFTPPGQRA ALAELLRVLA SSPIADGSGR WRSVELVLPE RGPDPENRVA 
PTGDGFVALF EESWLDVPGR SFEGLQFGRD GFALPEGWRL SEHWPLDPGI DRDAVLAFLD 
ALAERGPAPW RPEAVDRLVE RTGLSGPEAT VLLAGMPGVG AWGGNYLGTA LRKELGLSRD 
AALVAKATLG PLEDDERGQL LNAAVPADPL RLWTEGPDVD AVAEEWNTAH GRRTPVPEDL 
LIAAHKAFSR DDIAALLVGL ANPDRASWLT TDGGQRFSGI ELEQGDEAGF DSDHLDVLPR 
LLAWLGYHLP GGSPLRVELS RALELARARA SSPAFLVELG AWEEVRKVRK LLGVPALESG 
KVLVHRGFVE VAAEDDYCTV AVRPGLVGQA DRDLLVALAK ALDGEAVLND LDLLRSDGLA 
ALCAPTAGAQ DPSAHAQDPN NSVPHLVAEV ARALSLSPDA ATLYLQLLAL PDPTDANAAR 
WTGWKPTRLR KARAELAGTD LVLTAKRARS GRTLFLPGGW RDLPAPALPV ETWKERLYPL 
PVHPEGPVLP AEPVADLFAR AWAEVRAGAV PAYEKLGGER GRR