Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4029 |
Symbol | |
ID | 8328222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4729017 |
End bp | 4731491 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644944501 |
Product | hypothetical protein |
Protein accession | YP_003101738 |
Protein GI | 256378078 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0283808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTGT CCAGCGCCGT ATTACGCGCT TTGATCTGCG CCCTGCTGGC GCTGTCCGCG CTCGCGGCGC CCGCGACCGC CGAGCCGACC TGCCCCTGCG GGCTGTGGGA CGACCACGAC ACCCCCGCCG TCCTCGACGC CGCCGAGCCC TCCGCCGTCG AGCTGGGCCT GGCCTGGCAC GCCGACCGCG ACGGCTACGC GCTCGGGGTC CGCTTCTACA AGGGCCCCGG CAACACCGGC CCGCACACCG GCTCCCTCTG GTCCGCCGAC GGGCGCAGGC TCGCCACCGG CACGTTCGCC GACGAGAGCG GCACCGGCTG GCAGACCCTG CTGTTCCCCG CGCCCGTCGC GGTCCCGGCG GGCGTCGACC ACCTGGTGTC CTACCTCTCG CCCACCGGCC ACTTCTCCGT CGACCCCGAC TACTTCACCT CCCCCCGCCG CGCCGACCCG CTCACCGCCC CCGGCGCGGG CGCGTTCCGC ACCGGCGGCG GATTCCCGGA CCAGCGCTCC GGGGCGAGCA ACTACTGGGT CGACGTGCTG TGGGCCGCCG AACCCGGCCC CGACCTGCGC CCGCCCGCCC TCGTCGGCAC CACCCCGGTC GACGGCGCCT CCAGCTCCCC GACGTCCGGC CGGGTCACCG CCACCTTCGA CGAGCCGGTC GACCCGGACA CCGCGACCCT CGCCGTCACC GGCCCGGACG GCCCCGTCGC GGGCGCGGTG ACCACCTCCG CCGACCGGCG CGCCACCACG TTCGTCCCCG AGTCGCCGCT GCCCGGCGGC ACGCGGCACC GCGCCGAGGT CGTCGTCCAC GACGGCGCGG GCAACCGCAG GGCGCACACC TGGTCGTTCA CCACCGCCGC ACCCAGGCCC ACCGGCTGCC CGTGCTCGGT GTGGGACGAG AGCGCCGCGC CCGCCGTGCC CGCCAGCGCC GACCCGGCCG CCGTCGAGCT CGGCGCCAGG GTCCGCTTCG ACGGCCGCGC CGAGGTGCTG GGCGTGCGCT TCTACAAGGG CCCCGGCAAC ACCGGCCCGC ACACCGGCTC GCTGTGGGCG GGCAACGGCG TGCTGCTGGC CACCGGCGCG TTCGCCGACG AGAGCGCGAG CGGCTGGCAG ACCCTGCGCT TCACCTCCCC GGTGATCGTG CAGGCCGCCA CCGACTACGT GGTGTCCTAC TCCGCGCCGA ACGGCCACTA CGCCGCCGAC CTCGGCTACT TCCGCGCGGG CGAGGCCACC CACGGCGCCG CCCACCTGCC AGGGGACGGC GACGGCGGCC CCAACGGGCT CTACCGCTAC GGCGGCGGGT TCCCCACGTC CTCGGCGCAG GGCGCGAACT ACTGGGTGGA CGTGCTCTAC CGCAACGGCT TCAACGGCGA CACCACCGCG CCGACCCTGC TGGAGCGCTC CCCGGAGGGC GACGCCGTCG ACGCGCCCCT GACCACCACG TTCAGCGAGC CCGTCGACCC GGCCTCCGCC CAGGTGCGGC TGACCGACCC GGCGGGCGCG CGGCTGCGCG GCTCGGTGTC CCTGTCGGCC GACCTGCGCA CCGTCACCTG GCGCCCGGAC GGCGCGCTGC GCGGCGCGAC CCGCTACACC GCCCACGTCA TGGCCGCCGA CGTCAACGGC AACCCGCTCG CCGAACCGGG CTCCTGGTCG TTCACCACCG CCGCCCCGCG CTGCCCGTGC TCGCTGTTCA GCACCGCCAC CGCGCCCGCC CCGCCGACCA GTGGCGAGGA CACCGCGCAC GAGCTGGGCG TGCGCTTCAC CCCCACCGCC CCCGGCAAGG TCACCGGCGT GCGCTTCCAC AAGGGCCCCG GCAACACCGG CACGCACACC GGTTCGCTGT GGTCCGCTGA CGGGCGCAGG CTCGCCACCG GCACGTTCAC CGGCGAGAGC GCGAGCGGCT GGCAGTCGCT GACCTTCGCG ACCCCGGTCG TCGTGGTGCC CGGCGAGGTC TACGTCGCCT CCTACACCGC CCCGAACGGC CGCTGGTCGC TCGACGAGCG CTACTTCCAG CGCGCCCTCG TCGACACCCC GCCGCTGCGC ACCCCCGCCC CCGCCGACTG GGAGAGCGAC GGCGTCGGCG TCTACCTGCC CGGCGCGGGC TTCCCCACCC GCAGCTACCA GGGCAACAAC TACTGGGTCG ACGCCGTCTA CACCCCCAGC GCCGACACCA CCCCGCCCGT CCTGACCTCC CGCACCCCGC TCGCCGGGGC CGTCGAGGTC GACCCGCTGA CCACCGTCGT CGCCTCCTTC GACGAACCGC TCGACGCCAC CCGCAGCTCC GTCACCGTCA CCGGCCCCGA CGGCGCGCCG GTCGCGGGCC GGTTCACCGC GCGCCCGGAC GGCCTGACCC TGGTGTGGAC GCCCGACGCG CCGATGGGGG CCGGTCACCA CACCGTCTCG ATCCGCACGG CCGACGTCGG CGGCAACGTC CTGCCCAGCC CGGTGACCTG GGCGTTCACC GTCGGCGGGA GGTGA
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Protein sequence | MSLSSAVLRA LICALLALSA LAAPATAEPT CPCGLWDDHD TPAVLDAAEP SAVELGLAWH ADRDGYALGV RFYKGPGNTG PHTGSLWSAD GRRLATGTFA DESGTGWQTL LFPAPVAVPA GVDHLVSYLS PTGHFSVDPD YFTSPRRADP LTAPGAGAFR TGGGFPDQRS GASNYWVDVL WAAEPGPDLR PPALVGTTPV DGASSSPTSG RVTATFDEPV DPDTATLAVT GPDGPVAGAV TTSADRRATT FVPESPLPGG TRHRAEVVVH DGAGNRRAHT WSFTTAAPRP TGCPCSVWDE SAAPAVPASA DPAAVELGAR VRFDGRAEVL GVRFYKGPGN TGPHTGSLWA GNGVLLATGA FADESASGWQ TLRFTSPVIV QAATDYVVSY SAPNGHYAAD LGYFRAGEAT HGAAHLPGDG DGGPNGLYRY GGGFPTSSAQ GANYWVDVLY RNGFNGDTTA PTLLERSPEG DAVDAPLTTT FSEPVDPASA QVRLTDPAGA RLRGSVSLSA DLRTVTWRPD GALRGATRYT AHVMAADVNG NPLAEPGSWS FTTAAPRCPC SLFSTATAPA PPTSGEDTAH ELGVRFTPTA PGKVTGVRFH KGPGNTGTHT GSLWSADGRR LATGTFTGES ASGWQSLTFA TPVVVVPGEV YVASYTAPNG RWSLDERYFQ RALVDTPPLR TPAPADWESD GVGVYLPGAG FPTRSYQGNN YWVDAVYTPS ADTTPPVLTS RTPLAGAVEV DPLTTVVASF DEPLDATRSS VTVTGPDGAP VAGRFTARPD GLTLVWTPDA PMGAGHHTVS IRTADVGGNV LPSPVTWAFT VGGR
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