| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4021 |
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| Symbol | |
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| ID | 8328214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4720433 |
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| End bp | 4721644 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644944493 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003101730 |
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| Protein GI | 256378070 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0221723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCAGC ACGGCAGGGA CCCCCGGCGC AGCCCGGCGC GGCGCGGCGC GTCCGCCGCC
AAGCTCGGGT CCGTCGCGCT CGGCGCGGTG CTCGCCGCCT CCGTGCTGAC CGGCGTCGCG
CTCAACCGGG ACGACACCGT CACCGGCGCC GCCGTCCCCG AGGGCGGGAC CACCGAGACC
GGCGAGACCA CGACGACCAC GACCTCCACC CCGCCGCCCG ACCCGTGCGC CCCCGTCCTG
GCCGGGCTGA CCCCGCGCGC CGGGCTCGCC CAGCTGCTCC AGGTCGGCGT CAACCCGCGC
GGCCCGCAGG ACGCGCTGTC CATCGTCGGC TCCGAGCAGG TCGGCGGCAT CTTCGTCGGC
GGCGACGACG TCGGCCTGCT GTCGGGGGAC GCGCTGGCCG CCGTGCACGC CGCCTCCACG
CTGCCGCTCA CCGTCTCGGT GGACGACGAG GGCGGCCGGG TGCAGCGGAT CGACGCGCTC
GACGGCGACA TCCCCAGCGC CCGCACCATG ACCCGCACCC TGTCCACCGA GCAGGTCCGC
GAGCTGGCGC GCAAGCGCGG CGAGGCGATG AAGGCGCGCG GCGTCAACAC CGACCTCGCC
CCCGTGCTCG ACCTGACCTC CCAGGCCGCG AACACCGTGA TCGGCGACCG CTCGTTCAGT
GTCGACCCGG CCACCGCCGT CTCCTACGCC GAGGCGTTCG CCGAGGGCCT GCGCCAGGCC
GGGGTCGTCT CGGTGGTCAA GCACTTCCCC GGCCACGGCA ACACCTCCGG CGACTCGCAC
CTCGGCTCGG TCACCGCGCC CCCGCTCGCC CAGCTGCGCG CCCACGACCT CGCGCCCTAC
CGGGAGCTGC CCAGGTTCGG CGAGGACGTG CAGGTCATGG TCGGCCACAT CGCCGTCCCC
GACCTGACCG GCGGCCTGCC CGCGAGCCTG AGCCCGGCCG CCTACGAGCT GCTGCGCGGC
GAGTTCGCGT TCGACGGCCT GGTCATGACC GACGACCTGG GCGCGATGCG CGCGGTGACC
GACCTGGCCG ACCTGCCCGA CGCGGTGCTG CGCGCGCTGG TCGCGGGCGC GGACGTGGCG
CTGTGGTCGT CCGGCGGCCG GGTCGGCGAG GTGCTCGACC GGCTGCAGGC CGCCGTCGCG
AGCGGCGAGC TGAGCGCCGA GCGGGTGGAC CGCTCGCTGC GCCGCGTGCT CAAGTCCAAG
CACCTCTGCT AG
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| Protein sequence | MEQHGRDPRR SPARRGASAA KLGSVALGAV LAASVLTGVA LNRDDTVTGA AVPEGGTTET
GETTTTTTST PPPDPCAPVL AGLTPRAGLA QLLQVGVNPR GPQDALSIVG SEQVGGIFVG
GDDVGLLSGD ALAAVHAAST LPLTVSVDDE GGRVQRIDAL DGDIPSARTM TRTLSTEQVR
ELARKRGEAM KARGVNTDLA PVLDLTSQAA NTVIGDRSFS VDPATAVSYA EAFAEGLRQA
GVVSVVKHFP GHGNTSGDSH LGSVTAPPLA QLRAHDLAPY RELPRFGEDV QVMVGHIAVP
DLTGGLPASL SPAAYELLRG EFAFDGLVMT DDLGAMRAVT DLADLPDAVL RALVAGADVA
LWSSGGRVGE VLDRLQAAVA SGELSAERVD RSLRRVLKSK HLC
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