Gene Amir_4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4018 
Symbol 
ID8328211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4701286 
End bp4701927 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content79% 
IMG OID644944490 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003101727 
Protein GI256378067 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.163335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCATCC TGGTGGTCGG GGCCAATGGC AGGCTTGGGC GGCGCGTGGT GGCGCGGGCG 
CTGGAGGTCG GGCACGAGGT GACCGCGTTC GCCCGCCGGG CCGACGGGCT GCCCGCCGAC 
CCCGCGCTCG CGGTCCGGGT CGGCGCGGTC GCCGAGTGGC CCGCCGAGGT CAGGGCCGCC 
GTCTCCGGGC AGGACGCGGT GATCGCCGCG CTGGGCGCAC CGCCGTGGAA CGTCCGGCGG 
CGCGGACCCG CGGCCGTCGC GTCCGCCGTG GCGAACCTGG TGGTCGCGAT GTGCGCGGAG 
GGGGTGCGGC GGATCGCCGT GCCGGTCGCC TGGGGCGCGG GCGTCAGCCG GGTGGCGGCC 
TCGCCGGTCC TGCGCGTGCT CGCCGCCACG GTGGTCCGCC GCGACTACCG GGACTACGGG 
GCGGCCGAGC GGGTGCTGAC CACCTCCGAG CTGGACTGGA CCCTCGCCTA CCTGGGCGCC 
CTCACCGATC GCGGCGCGTC CGGGTGGCGG GCCAGCACCG ACATCGGGCG ACCGCGCGCG 
CTGGGCCTGT CGCGCTCGGC GGCGGCGGAG TTCCTGGTGT CGGTGGTGGA GCGGGACGAC 
CTGGCGCGGC GGCGCGTCGT GCTGCACGGA GCGGCGCGGT GA
 
Protein sequence
MRILVVGANG RLGRRVVARA LEVGHEVTAF ARRADGLPAD PALAVRVGAV AEWPAEVRAA 
VSGQDAVIAA LGAPPWNVRR RGPAAVASAV ANLVVAMCAE GVRRIAVPVA WGAGVSRVAA 
SPVLRVLAAT VVRRDYRDYG AAERVLTTSE LDWTLAYLGA LTDRGASGWR ASTDIGRPRA 
LGLSRSAAAE FLVSVVERDD LARRRVVLHG AAR