Gene Amir_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4006 
Symbol 
ID8328199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4687988 
End bp4688569 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content77% 
IMG OID644944479 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101716 
Protein GI256378056 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.685052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGCGA GCAGGCCAGG GGGACGGTCG GCGCGGGTGC GCGGTCAGGT GCTGGCCGCG 
GTGCTGGAGC TGCTGGCCCG CGACGGGCTG CGCGGCCTGC GCTACGAGGA GGTCGCGGAG 
CTGGCCGGGG TGCACAAGAC CAGCGTGTAC CGCCGGTGGC CCACGCGCGA CGCCCTGGTC 
GCCGAGGCGT TCTCCGACTT CGCCGAGCGC AACGCCCCCC TGCCCGACAC CGGTGACCTG 
CGCGCGGACC TGGTGGAGTA CCTGTGCGCG CTGGGCGCGG TGGCGGGCAG CCCGCAGGGG 
CGGGCGCTGA ACGCGCTGCG GTGGGCCGGG ATCAGCGAGG AGGGCGAGCT GCGCGAGCTG 
CTGCGGGGGG TGTGGACCGG GCGGTTGGAG TCGTTGCAGC GCAGGCTGGA CCGCGCGGTG 
GCGGACGGGC AGCTGCCCTG GGCGGACGCC GAGCTGCTCG ACGGGCCGCT CGCCGGGGCG 
GTGCACCAGC ACGCGCGGTT GGGCGGGGAG TTCACCCGCG CCCGCGCCGA GCTGCTGGTG 
GACGTGGTGC TGGCGGGCAT CCGGGCGGTT CCGGGGCCCT AG
 
Protein sequence
MTASRPGGRS ARVRGQVLAA VLELLARDGL RGLRYEEVAE LAGVHKTSVY RRWPTRDALV 
AEAFSDFAER NAPLPDTGDL RADLVEYLCA LGAVAGSPQG RALNALRWAG ISEEGELREL 
LRGVWTGRLE SLQRRLDRAV ADGQLPWADA ELLDGPLAGA VHQHARLGGE FTRARAELLV 
DVVLAGIRAV PGP