Gene Amir_3987 details

Gene Information

• Locus tag: Amir_3987
• ID: 8328180
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 4670740
• End bp: 4671501
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644944461
• Product: glycoside hydrolase family 12
• Protein accession: YP_003101698
• Protein GI: 256378038

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAGC GGTCACTCGC CGCCGCCCTG CTGGTCGCGG CAGGCATGGC CGTCCCGGTC 
GTCACCGCCG CAGCCACCGG GGCGCAGGCC GACGCCGCCC TGTGCGGCCA GTACGACAGC 
ACCCAGGTCC AGGGCCGGTA CGTGGTCATG AACAACCGTT GGGGCGGCAA CGCCGAGCAG 
TGCGTCGACG TCACCGGGTC CGGCTTCCGG CTCACGTCGC AGAAGGGCAG CAAGCCGACC 
GACGGCGCGC CCCTGTCGTA CCCGGCCATC TACGGCGGTT GCCACTACGA CAACTGCTCG 
CCCGGCACGA ACCTGCCCGT GCGGATCGGC GACGTGGCGA GCGCGTCCAC GTCGATCGGC 
TACGGGTACA ACGCGTCCGG GATCTACAAC GCGTCCTACG ACATCTGGAT GGACCCCTCG 
CCCAAGCGCA CCGGGGTCAA CCAGGTCGAG CTGATGATCT GGCTCAACCG GCAGGGGCCG 
ATCCAGCCCA TCGGCAGCCG GGTGGGGAGC ACGACCATCG CCGGGCGCAC GTGGGAGGTG 
TGGCAGGGCA ACAACGGCGG CAACGACGTG GTGTCCTACC TCGCGCCCTC GCCGATCTCG 
AACTTCTCGT TCGACGTGCT GGACTTCGTC CGGGACGTGG ACAACCGCAC CCAGGTCTCC 
ACGTCGTGGT ACCTGACCAG CGTGCAGGCC GGGTTCGAGC CCTGGCAGGG CGGCGAGGGG 
TTGTCGGTCA ACAACTTCTC GCTGGACGTC CGGACCCGCT GA 

 

Protein sequence

MKQRSLAAAL LVAAGMAVPV VTAAATGAQA DAALCGQYDS TQVQGRYVVM NNRWGGNAEQ 
CVDVTGSGFR LTSQKGSKPT DGAPLSYPAI YGGCHYDNCS PGTNLPVRIG DVASASTSIG 
YGYNASGIYN ASYDIWMDPS PKRTGVNQVE LMIWLNRQGP IQPIGSRVGS TTIAGRTWEV 
WQGNNGGNDV VSYLAPSPIS NFSFDVLDFV RDVDNRTQVS TSWYLTSVQA GFEPWQGGEG 
LSVNNFSLDV RTR