| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3982 |
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| Symbol | |
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| ID | 8328175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4664740 |
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| End bp | 4665765 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644944456 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_003101693 |
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| Protein GI | 256378033 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGACCG AACACGAGGC GATGGCGCGG GCGCTGGAGC TGGCCGCGAC GCCGGGGGTC
CCGCTGGGGC CCAACCCCCG CGTGGGGTGC GTGCTGCTGG CCGACGACGG GACGGTGGTC
GCCGAGGGCC ACCACCGGGG CGCCGGGACC GCGCACGCCG AGGCCGACGC GCTGGCCGAG
GCAGGCGCCG CCGCGCGCGG GACCACCGCC GTGGTGACGC TGGAGCCGTG CAACCACACC
GGCCGGACCG GGCCGTGCGC CCGCGCGCTG GTGGAGGCCG GGGTGCGGCG GGTGGTGTTC
GCCCAGTCCG ACCCGAACCC GGTCGCCACC GGGGGGACGC GGACCTTGCG GGACGCCGGG
ATCGAGGTCG AGCACGGGCT GATGGCCGAC CGCGCCCGCG CGCTGAACCG GGCCTGGGTG
TTCGGCGTCG AGCACGGGCG ACCGCTGGTG ACCTGGAAGT TCGCCGCGAG CCTCGACGGG
CGCAGCGCGG CGGCGGACGG CACCAGCAGG TGGATCTCGA ACTCGGCCGC GCGCGCCGAC
GTGCACCGGC TGCGCGCCGG GTGCGACGTG GTGCTCGTGG GCGCCGAGAC GGCCGTGGTG
GACGATCCCC GGCTGACCGC GCGCGGCCCC GACGACGCCC CGCTCGCGCA CCAGCCGCTG
CGCGCCGTGC TGGGCGAGCG GGAGCTGCCG CCGACGTTGC GCCTGTTCGA CGGGTCGGCC
GAGGTGGCGC AGCTGCGCAC CCGCGACCCG AGGGCCGCGC TGGCCGAGCT GTTCGAGCTC
GGTCGCAGGC ACGTGTTCCT GGAGGGCGGG CCGACCGTGG CCGCCGCGTT CCTGCGCGCG
GGCCTGGTGG ACGAGATCGT CGCGTACGTG GCCCCGGTGC TGCTGGGCGC GGGCCGGGCC
GCCGCGGGCG ACCTGGGGAT CACCGGCATC GGCGCGGCGC TGCGCCCGGT GGTGACCGAC
GTGACCGTGA TCGCCGGGGG CGACGGGGAG GAGCCGAACG TCCGCTTCAC CCTGACCCCC
GCCTGA
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| Protein sequence | MLTEHEAMAR ALELAATPGV PLGPNPRVGC VLLADDGTVV AEGHHRGAGT AHAEADALAE
AGAAARGTTA VVTLEPCNHT GRTGPCARAL VEAGVRRVVF AQSDPNPVAT GGTRTLRDAG
IEVEHGLMAD RARALNRAWV FGVEHGRPLV TWKFAASLDG RSAAADGTSR WISNSAARAD
VHRLRAGCDV VLVGAETAVV DDPRLTARGP DDAPLAHQPL RAVLGERELP PTLRLFDGSA
EVAQLRTRDP RAALAELFEL GRRHVFLEGG PTVAAAFLRA GLVDEIVAYV APVLLGAGRA
AAGDLGITGI GAALRPVVTD VTVIAGGDGE EPNVRFTLTP A
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