Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3976 |
Symbol | |
ID | 8328169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4660107 |
End bp | 4660841 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644944450 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003101687 |
Protein GI | 256378027 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTTC TTGAGGGCAA GGTCGCGGTC GTGACCGGGG CGAACGCGGG CATCGGCCTG GCGATCGCGC GGGCCTACCA CGCCGAAGGC GCGCGGGTCT TCGTCACCGG CCGCCGCCAG GCCCAGCTCG ACGCGGTCGA GGCCGAGCTG GGCCAGGGGG TGACCGGCGT CCGCTGCGAC GTCGGCGACC TGGCCGACCT CGACGCGCTC TACGCGCAGG TCGCGGAGCG GGCCGGGCGG ATCGACGTGC TCGTCGCCAA CGCCGGGATC GGGATCACCG CCCCGCTGGG CGAGATCACC GAGGAGCAGT TCGACGCCAT GTTCACCACC AACGTCAAGG GCTCGCTGTT CACCGTGCAG AAGGCGCTGC CGCTGCTGGC CCCCGGCGCG TCGATCATCT TCACCGGGTC GTCGTCCGCC ACCCGCCCGC AGCCGTACCT GCCGGTGTAC GGGGCGACCA AGGCCGCGAT CCGCAACCTG GTCCGGGGCT TCGCCCACGG CGCGGGGGCG GGCGGGTACC GGGTCAACGT GCTCTCCCCC GGCGGCACCC GCACCCAGGG CCTGGTCGAC CTGCTCCCGC CCGAGGAGCT GGCCGCCGCG GGCGCGTCGA TCCCGCTCGG CAGGCTGGCC GAGCCCGAGG AGATCGCGGC GGCGGCGGTC TTCCTGGCCT CGGACGCCTC CAGCTACGTC AACGGCGCCG AGCTGGCCGT CGACGGCGGG GCCGCCCAGA TCTGA
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Protein sequence | MNVLEGKVAV VTGANAGIGL AIARAYHAEG ARVFVTGRRQ AQLDAVEAEL GQGVTGVRCD VGDLADLDAL YAQVAERAGR IDVLVANAGI GITAPLGEIT EEQFDAMFTT NVKGSLFTVQ KALPLLAPGA SIIFTGSSSA TRPQPYLPVY GATKAAIRNL VRGFAHGAGA GGYRVNVLSP GGTRTQGLVD LLPPEELAAA GASIPLGRLA EPEEIAAAAV FLASDASSYV NGAELAVDGG AAQI
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