Gene Amir_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3952 
Symbol 
ID8328145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4632114 
End bp4633286 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content78% 
IMG OID644944428 
Producthypothetical protein 
Protein accessionYP_003101665 
Protein GI256378005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0654267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCACG AGGGAGTCCG GTGGGAGGGG CACACCCACC GGGAGATGCA CGACATGCTG 
CACACCGACG CCGATCCGGG ACGGGTCGTG GAGCGCGGGG CGCAGTGGGA CGAGATCTCC
GCGGAGCTGA CCGAGGTCGT CGCGGAGATG GACGCGGTCA GGGAGAAGCT CGGGCAGTGC
TGGACGGGCG AGGCCGCCAC CGCCGCCTCG GGCCTGCTGG GCGAGCACAC CGAGCGCCTG
ACCAGCCTGA GCCGGATCGC GGGGGGCACG GGCTCCCACA TCAACACCGC GGGCGTCCAG
TTGCAGTGCG CCAGGGAGCT GATGCCGAAG GTGCCCGGCT TCCCGGAGGA CGCGGCTTTT
GCCTTGGGGG GCGTGAATCC GCTGACCGGG GTGGCGCTGG GGTCCCTGGC GGGGCAGGCC
GCGCGCGCAG CCTGGCTGGA GGGCGAGAAG CAGCGGGCCG TCGAGGTCAT GCGCGGCCAC
GAGTCGTGCT CCCGGGACAT CGGCCACATG GTGGCCAACG ACGAGAACTC CAGGCGGGCC
CGCGACTGGG AGGTCTTCGC CGGTGGGCCG GGGGCGTCGG ACTTCCCGGT GGAGCTCGAC
CCGCACGCCG ACGGCCTGGG GGCGGGCGGC CCCACGGGCG TCCCGCCGCG CGGGTCGGGG
GAGGGCTTCG CCTTCGACGA CGCTCCGGTG GCGCCGGCCG GCCGCGGCGC CTGCGAGCCG
GTGGCGGGAG CGGTCGGGGG GACGACCGCG GTGTCGTCGA GCGCCGAGGC CGATCCCAGG
GGTCACGGGG CGCACCCCGC CTCCGCGCAG CAGGCGGCGG GCCAGGCGGG TGGCCCGCAG
GCCCAGGCGT GGCAGGTCGG CGCGGGACGT GGCGGCGCGC GGGGTGGCGC GCGGCCGTCC
GGCGGCGCGG GCGCTGCCCA GGCCGCCCAG CCCTGGTCCG GCGCGGCCCC CTCGGTGCTC
GGCCGGGGAC CCGGTGAGGC GCGCCAGGGC GAGGCGCGTC CCGTCCCGCC GCGCGCTCCC
GGAGTCGGGG GCCCCTCGCT GTACGGGCCG CTCGGGCAGT CCCCGGCCGA CGGGCGCGGG
TCGGAGCAGG AGTGGCGGCG CAAGGTCCCG CACGAGGAAG GGCTGTTCGG GGTGGAAGGG
CTCCTCGCGG CGCCCAGGGT CATCGGCGAG TGA
 
Protein sequence
MRHEGVRWEG HTHREMHDML HTDADPGRVV ERGAQWDEIS AELTEVVAEM DAVREKLGQC 
WTGEAATAAS GLLGEHTERL TSLSRIAGGT GSHINTAGVQ LQCARELMPK VPGFPEDAAF
ALGGVNPLTG VALGSLAGQA ARAAWLEGEK QRAVEVMRGH ESCSRDIGHM VANDENSRRA
RDWEVFAGGP GASDFPVELD PHADGLGAGG PTGVPPRGSG EGFAFDDAPV APAGRGACEP
VAGAVGGTTA VSSSAEADPR GHGAHPASAQ QAAGQAGGPQ AQAWQVGAGR GGARGGARPS
GGAGAAQAAQ PWSGAAPSVL GRGPGEARQG EARPVPPRAP GVGGPSLYGP LGQSPADGRG
SEQEWRRKVP HEEGLFGVEG LLAAPRVIGE