Gene Amir_3926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3926 
Symbol 
ID8328119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4606993 
End bp4608054 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content72% 
IMG OID644944405 
ProductAlpha-N-arabinofuranosidase 
Protein accessionYP_003101642 
Protein GI256377982 
COG category[R] General function prediction only 
COG ID[COG3940] Predicted beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTGC GAAGTGGGCT GCGGGCGGTG CGGCGGCTGA CCGCCCTCGC CGCGGCGGCC 
GTTCTCGCGT CCGCGCTGGC CGCCGCGACC GCCCCGCAGG CGGTCGCGGC GCCCGGCCCG
TCCTTCACCA ACCCCCTGGT CGGCGCGCCC AACAGCGCCG ACCCGTCGAT CGTCCACAGC
GGCGGCAACT GGTACTACGT GGCCACGACC TGGTCCTCGA AGATCGTCAT GCGCAAGTCC
TCCACCATGG CGGGGCTCAA GACCGCGGCG GAGCAGACGG TGTTCACCCT CGCCCCCGGT
CCCGGCTGCT GCACCATGTG GGCGCCGGAC CTCCAGTGGA TCAACAACCG GTGGCACCTG
TACTTCTCCG CCGACGCGAC CCCCGGTCAG GGCCAGCGCC GCACCGGCGT CCTGGAGAGC
AACGGCACCG ACCCGCTGGG CCCCTACACC TACCGGGGCA TCCTCAACCT GGAGCCCGAC
GCCGGGTGGG CGATCGACGG CAGCGTGGTC CGGTTCAACG GCTACGCCAA CCACTTCGTC
TACTCGGCGT TCCGGGGCGG CGAGCAGAGC CTGTTCATCG CCCCGATGTC CTCACCCGCG
CAGGTCTCGC GCAACGGGGT CCGGATCTCC TCGCCGACGC TGTCGTGGGA GCGGCAGGGC
GGGGCGGTCA ACGAGGGCCC GTACGCGGTG TACAACGCGG GCAAGACGTT CCTGACCTAC
TCGGCCAGCT CCTGCCAGAC GCCCGACTAC AAGCTCGGGA TGCTGACCTG GACCGGCGGC
GACCCGATGT CGCCGAGCTC GTGGGTGAAG AGGTCCACGC CGATCTTCCA GCGCAACGAC
GCGGCGGGCG TCTACGGCCC CGGCCACGCC TCCTTCGTCA GGTCGCCCGA CGAGAGCGAG
ACCTGGGTCG TCTACCACGC GAACTCCTCC GCCGGCCAGG GCTGCGGCAC CACCCGCACC
ACGCGCGCGC AGAAGATCGG CTGGAACTCG GACGGCTCGC CCGACCTCGG CGTCCCGGTG
GCGACCGGGA CCACGATCAC CGGCCCGTCC GGCGACTCGT GA
 
Protein sequence
MSVRSGLRAV RRLTALAAAA VLASALAAAT APQAVAAPGP SFTNPLVGAP NSADPSIVHS 
GGNWYYVATT WSSKIVMRKS STMAGLKTAA EQTVFTLAPG PGCCTMWAPD LQWINNRWHL
YFSADATPGQ GQRRTGVLES NGTDPLGPYT YRGILNLEPD AGWAIDGSVV RFNGYANHFV
YSAFRGGEQS LFIAPMSSPA QVSRNGVRIS SPTLSWERQG GAVNEGPYAV YNAGKTFLTY
SASSCQTPDY KLGMLTWTGG DPMSPSSWVK RSTPIFQRND AAGVYGPGHA SFVRSPDESE
TWVVYHANSS AGQGCGTTRT TRAQKIGWNS DGSPDLGVPV ATGTTITGPS GDS