Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3926 |
Symbol | |
ID | 8328119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4606993 |
End bp | 4608054 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644944405 |
Product | Alpha-N-arabinofuranosidase |
Protein accession | YP_003101642 |
Protein GI | 256377982 |
COG category | [R] General function prediction only |
COG ID | [COG3940] Predicted beta-xylosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGGTGC GAAGTGGGCT GCGGGCGGTG CGGCGGCTGA CCGCCCTCGC CGCGGCGGCC GTTCTCGCGT CCGCGCTGGC CGCCGCGACC GCCCCGCAGG CGGTCGCGGC GCCCGGCCCG TCCTTCACCA ACCCCCTGGT CGGCGCGCCC AACAGCGCCG ACCCGTCGAT CGTCCACAGC GGCGGCAACT GGTACTACGT GGCCACGACC TGGTCCTCGA AGATCGTCAT GCGCAAGTCC TCCACCATGG CGGGGCTCAA GACCGCGGCG GAGCAGACGG TGTTCACCCT CGCCCCCGGT CCCGGCTGCT GCACCATGTG GGCGCCGGAC CTCCAGTGGA TCAACAACCG GTGGCACCTG TACTTCTCCG CCGACGCGAC CCCCGGTCAG GGCCAGCGCC GCACCGGCGT CCTGGAGAGC AACGGCACCG ACCCGCTGGG CCCCTACACC TACCGGGGCA TCCTCAACCT GGAGCCCGAC GCCGGGTGGG CGATCGACGG CAGCGTGGTC CGGTTCAACG GCTACGCCAA CCACTTCGTC TACTCGGCGT TCCGGGGCGG CGAGCAGAGC CTGTTCATCG CCCCGATGTC CTCACCCGCG CAGGTCTCGC GCAACGGGGT CCGGATCTCC TCGCCGACGC TGTCGTGGGA GCGGCAGGGC GGGGCGGTCA ACGAGGGCCC GTACGCGGTG TACAACGCGG GCAAGACGTT CCTGACCTAC TCGGCCAGCT CCTGCCAGAC GCCCGACTAC AAGCTCGGGA TGCTGACCTG GACCGGCGGC GACCCGATGT CGCCGAGCTC GTGGGTGAAG AGGTCCACGC CGATCTTCCA GCGCAACGAC GCGGCGGGCG TCTACGGCCC CGGCCACGCC TCCTTCGTCA GGTCGCCCGA CGAGAGCGAG ACCTGGGTCG TCTACCACGC GAACTCCTCC GCCGGCCAGG GCTGCGGCAC CACCCGCACC ACGCGCGCGC AGAAGATCGG CTGGAACTCG GACGGCTCGC CCGACCTCGG CGTCCCGGTG GCGACCGGGA CCACGATCAC CGGCCCGTCC GGCGACTCGT GA
|
Protein sequence | MSVRSGLRAV RRLTALAAAA VLASALAAAT APQAVAAPGP SFTNPLVGAP NSADPSIVHS GGNWYYVATT WSSKIVMRKS STMAGLKTAA EQTVFTLAPG PGCCTMWAPD LQWINNRWHL YFSADATPGQ GQRRTGVLES NGTDPLGPYT YRGILNLEPD AGWAIDGSVV RFNGYANHFV YSAFRGGEQS LFIAPMSSPA QVSRNGVRIS SPTLSWERQG GAVNEGPYAV YNAGKTFLTY SASSCQTPDY KLGMLTWTGG DPMSPSSWVK RSTPIFQRND AAGVYGPGHA SFVRSPDESE TWVVYHANSS AGQGCGTTRT TRAQKIGWNS DGSPDLGVPV ATGTTITGPS GDS
|
| |