Gene Amir_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3902 
Symbol 
ID8328095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4583361 
End bp4583861 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content71% 
IMG OID644944385 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003101622 
Protein GI256377962 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.760355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCCCG AAGACGACCC GTCCCGCTCG CTGACCGTCG CGAACCCCGA CGCCCCCGGC 
ACGACCCACG TGTCGCTGGT GGGCAACACC TACGCGATGC TGATCTCCGG CGAGCAGACG 
AACGGCCGGT ACTGCCTGAT CGAGATGCGC GTCCCCGACG GCGGCGGCCC GCCCCCGCAC 
CGCCACGACT TCGAGGAGAT GTTCACCGTC CTGGAGGGCG AGATCGAGTT CACCTTCCGC 
GGCGAGAAGC ACGTCGTGCC CGCCGGGACC ACCATCAACA TCCCGGCCAA CGCCCCGCAC 
AACTTCCGCA ACACCTCCGG CGCCCCCGCC CGGATGCTGT GCATGTGCAC GCCCGCCGGT 
CAGGACGAGT ACTTCCTGCG GATCGGCGAC GTCATCGAGG GCAGGGACGC CCCGGCGCCG 
CAGCTCACCC CGGAGGAGCA GGCCGAACGC CGCAAGCGCG CCGCCGACCT CGCGTCGCGG 
TACCGGTCCG TGTTCCTCTG A
 
Protein sequence
MIPEDDPSRS LTVANPDAPG TTHVSLVGNT YAMLISGEQT NGRYCLIEMR VPDGGGPPPH 
RHDFEEMFTV LEGEIEFTFR GEKHVVPAGT TINIPANAPH NFRNTSGAPA RMLCMCTPAG 
QDEYFLRIGD VIEGRDAPAP QLTPEEQAER RKRAADLASR YRSVFL