| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3878 |
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| Symbol | |
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| ID | 8328071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4543461 |
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| End bp | 4547096 |
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| Gene Length | 3636 bp |
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| Protein Length | 1211 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644944365 |
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| Product | protein of unknown function DUF312 |
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| Protein accession | YP_003101602 |
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| Protein GI | 256377942 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.53376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGTTGC TCGTCTCCGC GAGCCCCGCC GTGGCACAGC AGGAATCGCC GGGCGATCGG
GCGCAGGTGT TCGCCCTGAT GCGCACCGGA GGCCCGGTCG TATCCGCGGG CGCGGAGGCG
GCGCTGGTCG CGTCGGACGC CGAAGTGCGC GACTTCTTGA ACACCGCGCT CCCCGCGGCG
CAGGAGGCCG ACGACCGGAT CGCCGCGCAG CGGTTGCTCG CGGACGGGGG CCCTGCCACG
CGCGACGCGG TCAACGCCGC CCTGAGCGGC TCGATCAGTG ACGTGCGGGC GTTCCTGGTG
AGCGGGTGGC GTCGCCCCTG GGAGGACGAC CTGCGCATCC GGGTGCAACG ACTCCTGTCC
GCGGCGACCG GGCCCATGGT CCGCGAGCGC GCCAACGCCG CGCTCAACGG CAACGACCAG
GCGCGGCAGG ACTTCCTGAC CACCGGGTGG CGTCGAGCCC AGAACGACGA CGACCGCATC
GCCGTGCAGC TCCTGCTCAA CGCGGGCGGC CCTGCGGTGC GCCGCGCCGC GAACATCGCG
CTGTCCGGCG CTGACACCGA GGTGCGCGAC TTCCTCACCA GCGGGTACGC CGTCGCGCTG
CAGCGGGACA ATGAAATCGC CGCGGTCGCG CAACTGACGA TCCTGGTGCA GAACGCCTCA
TCCCGTGCCG GGCTGCAGAG CGAGGTGGCC AAGGACGAGG CCGGGCGCGC GGTGGCGGCG
GCCGCTGCGG CGAAGCAGGC CGCTCAGACC GCTGCCCGCG AGGCGGAGCA GGCCAAGGAC
TCCGCGGTGC GGGCGTCGGC TGCGGCGGGA CGCGCCGCCG ATGCCGCGAC ACGGGCGGCT
GCCGCCGCGC AGGCAGCGAT CAACGCCATC GCCTCGGCGG TCGCGGCCGC GCGCGAGGCG
GCGAACGCCG CCTCGCAGGC CTCGTGGGCC GCGTCCAAGG CGGGAGACGC CGCCGCACGG
GCTCAGCACG CCGCTGCCGC CGTCATGACC GGCCGGGAGA ACATCGAGCA GGCCTCGAAC
GCAGCGGTGA CCGCGGCGCA GGCGGCCCAG GCCGCCCAGG ACGCGGCGAC CGCCGTGCAG
AAGGCTGCTG AGGTGGCCCG GCAGGTGGCC ACCGCGGCGG ACGCGATGGC CAGGGTCAAC
ACCGACGCCG CCGATGCCGC GCAAGCAGCC CTCGACGCCG ACAAGTACGC GGCCCAGGCG
GGCGCCGAGG CAGGTCGCGC GTCGAGCGCC GCGGCCAGGG CCCAGCGGAA CGCCGGTGAA
GCGCGCCGTG CGGCGCAGGC CGCGTCGGCG CTGGCCACCG AGGCGGCCCG ACAGGCCGAC
GAGGCGCAGA AGGCAGCTGC GCAGGCCGCC ACCCACGCCC GCAACGCGTC CGACGCGGCC
AAGGCCGCGG TCAAGCAGGC GAGCCAGGCC GATGGTGCGG CGACCCGCGC GCAGACCGCC
GCGGATGCCG CACGCACCGC GGCCGAGCAG GCGCAGAAGG CAGCCGACCA GGCCAACCAG
ACGTTCGAAC TGGCCCGCAA GGCGGATGAA GAGCAGTTGG CCCAGCGGAC GAGCCAGGCG
ACCCGCGACG CGCAGGACGC GCTGACGGCG GAGAGCAATG CCAAGCGCAC GACCGACCAG
GGCTGGAAGG CCGGGCAGGT CTTCCAGCCC GACGCCGACA CCAAGGCGCT GCTGGACCAG
GCTGCTGCCC AGGGCACCTC GGCCGCCGAC GCGGCCCAGG CCGGTCGCAA GGCGGCGCTG
CGCCTGTGGC GTGCTGCGGG ACCCGGCGTC ACCACGGCTT CCGCCAAGGC GCTGTCCGGC
GACGACGCGG CGGTGACCGC GTTCGTGCGC ACCGGGTTGG CCTCCGCCAC GGAGCAGGAC
GACCGCACGA GCGCGCGGAT CATCGGGGGC GCCTCGTTGC GACCCGCCGC CAGGCAGGCC
GCAACGATCG CGGTCGCGGG CGACTACGCG CAGGTGAAGG CGTTCCTAGC TACCGGCGCC
TACGACGGCA AGGACGACGA CGATCGGATC GCCGTCCAGC GCATCCTCAG CGAGGGCGGC
AGGGCGACCA GGGACGCAGC CAACAAGGCG CTGTCGGGGA CCATCGATGA CGTCCGGGAG
TTCCTGAGGG TCGGCTACTT CAAGGCCGCG GAGGATGACG ACCGGATCGC CGTCCAGGAG
ATGGTGTCCT CGGGTGGGCC CGAATTGCGT GCCGCAGCGA ACGCCGCACT GTCCGGACCG
TGGTCCTACG TCCGAGACTT CCTCACCATC GGCCAGTACA AGGCGGGCAA CCGCGACGCC
GAGGCAGCGT TCCACGTGGC CGCCGTCAGC GGTTACCTCG CCTCGGCGTC CCAGGCTGCG
GCGACCGCTT GGCAGTACGC GGCGACCGCG TCACAGGCCG CCGCGACGGC GCGCAACGCC
GCCGCCGAGG CCAACCGCTG GGCAGGCGAG GCCGTGGCCT CCGCCGACCG GGCGCGCAAG
TACGCCGAGC AGGCCAGGGG GTCGGCCGAC CGAGCCGAGC AGTCCGCGCA GGACGCGGCG
ATCTCCGCGC GCACTGCCAG GGAGGCGGCC TCAACCACTC AGCGCTACGC CGACGCGGCT
TCCGCGTCGT CCGCCCAGGC GTCGGCATCG GCGAGCAGGG CCTCGCTGTT CGCCGCGGAC
GCGCGCAACG CCGCAGAGGC GGCGCGCAAG GACGCAGAGG CGGCGGGTAA GTCCTACGCC
TTGGCTTTGC AGGCGCAGTT GGACGCGAAT ACCGCGGTCT TGCAGAAGCA GACTCAGGAG
GACACGCGGA AGGCGGCGGC GGACACGCGG GAATCGGTGT CTGAGCTGCG CGACGCGCTT
CAGGAGGCCC TTGACCAGGG TGGGCTGCCT GACGACCTCC GCAAGACCCT GGAGCAGTAC
CGCGACCAGG TCATGGCACT GCTCACCCTG CTCGACCAGA TGGCTGCGGG GACCCTGGAA
TTCGTCCAGG AGCACGCGGG CGATTTGCTG GCCCTGCTCA CCGATGTGCT TGAGATCGGC
GCGGGCCTTG GTTTGACGCT CGCGGGTGTC GTCGTGTCGA CACCCGGTTT CGAGGTGTGC
GCCGTCGAGA TCGGGACCGC TACCGCGATC GGCGCGGGTG CTGGTGCGGC TGCGGCCGGT
GTGGGGGCCC TGCCAGGGGG CGCGGCCGGT GCGGTGACAG GGCTGATCGC GTGTGTCTTC
ACCGGTGGGC CTGCGATCGC GGCTGGTGTT GGCATGGTGG CCGGCGGGCT GACCATGGCG
ATGAACGGCT TCGACAAGGC CGCTGAGGAC CTTCGTGAAG CAGGGAAAAA AGCAAATGAT
TTGGGTAAAG CTCGCGAAAA TAGAGTTGCC GAGTTGACCG GCGGAAAGTT GGCAAAAGAC
GAGAAGGGGC AGGATATTAA GCTCATCAAG CCGGGAGCCA GCGCGGCCGG CCTTGACGTA
AGAGGCCCCA AAGGTGAGTA CATCGCAGTC GGAGGCGGCG CCAAAGCAAA AAGAGTTCAG
AAGTTTGAAG AGAAATTGAA TACCTTGAAA TGGTGCGCAG ACAGGGACGG GGTGCGCGCC
ATGGCCTACC TTGCGGAAGG TTCTCCGCAG CTTCTTATCG ATATTGCTAT AAAGCAACTC
GGAGTTGATA ACGTGGTCAT CTTTTCAATG AAGTGA
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| Protein sequence | MALLVSASPA VAQQESPGDR AQVFALMRTG GPVVSAGAEA ALVASDAEVR DFLNTALPAA
QEADDRIAAQ RLLADGGPAT RDAVNAALSG SISDVRAFLV SGWRRPWEDD LRIRVQRLLS
AATGPMVRER ANAALNGNDQ ARQDFLTTGW RRAQNDDDRI AVQLLLNAGG PAVRRAANIA
LSGADTEVRD FLTSGYAVAL QRDNEIAAVA QLTILVQNAS SRAGLQSEVA KDEAGRAVAA
AAAAKQAAQT AAREAEQAKD SAVRASAAAG RAADAATRAA AAAQAAINAI ASAVAAAREA
ANAASQASWA ASKAGDAAAR AQHAAAAVMT GRENIEQASN AAVTAAQAAQ AAQDAATAVQ
KAAEVARQVA TAADAMARVN TDAADAAQAA LDADKYAAQA GAEAGRASSA AARAQRNAGE
ARRAAQAASA LATEAARQAD EAQKAAAQAA THARNASDAA KAAVKQASQA DGAATRAQTA
ADAARTAAEQ AQKAADQANQ TFELARKADE EQLAQRTSQA TRDAQDALTA ESNAKRTTDQ
GWKAGQVFQP DADTKALLDQ AAAQGTSAAD AAQAGRKAAL RLWRAAGPGV TTASAKALSG
DDAAVTAFVR TGLASATEQD DRTSARIIGG ASLRPAARQA ATIAVAGDYA QVKAFLATGA
YDGKDDDDRI AVQRILSEGG RATRDAANKA LSGTIDDVRE FLRVGYFKAA EDDDRIAVQE
MVSSGGPELR AAANAALSGP WSYVRDFLTI GQYKAGNRDA EAAFHVAAVS GYLASASQAA
ATAWQYAATA SQAAATARNA AAEANRWAGE AVASADRARK YAEQARGSAD RAEQSAQDAA
ISARTAREAA STTQRYADAA SASSAQASAS ASRASLFAAD ARNAAEAARK DAEAAGKSYA
LALQAQLDAN TAVLQKQTQE DTRKAAADTR ESVSELRDAL QEALDQGGLP DDLRKTLEQY
RDQVMALLTL LDQMAAGTLE FVQEHAGDLL ALLTDVLEIG AGLGLTLAGV VVSTPGFEVC
AVEIGTATAI GAGAGAAAAG VGALPGGAAG AVTGLIACVF TGGPAIAAGV GMVAGGLTMA
MNGFDKAAED LREAGKKAND LGKARENRVA ELTGGKLAKD EKGQDIKLIK PGASAAGLDV
RGPKGEYIAV GGGAKAKRVQ KFEEKLNTLK WCADRDGVRA MAYLAEGSPQ LLIDIAIKQL
GVDNVVIFSM K
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