Gene Amir_3867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3867 
Symbol 
ID8328059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4533480 
End bp4534139 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID644944354 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003101592 
Protein GI256377932 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000371985 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCTGT CAAGCACACC AAGCACGCCA AGCGGCACAC CAAGCGGCAC GTCAACCACC 
GCAAGCAGCA CACCAACCAC CGGCGACGCC CGCGAACGCC TCCTCACCCG CCTCCTGGAC 
GTCTTCGACG ACGGCCTCCC ACCCCCGGAG ACCTCGCTCC GCGAGATCGC CACCCGAACC 
GGGACCAGCC ACGCCCTCCT CCGCTACCAC TTCGGCTCAC TGGCGGGCGT CCTGGCGGCA 
GTCCTCGGGG CCCAACGCAC CCGAGACAAC AAAACCCTGG TCAAAACCGC CGACCAGGCC 
ACCTTCGCCG ACCTCGCCCA CGCGATCTGG CAGGTCTACA CCCGCCCGGA CCAGCTCTCC 
CGAATCCGCG GCTTCTTCCA CGTCGTGGGC CTGGCCGCCT ACCGCCCGGA CGACTTCCGC 
GAGTTCATCT CATCCCTGGA CGACCTCACC AAGCTCCTGG CCTCACTGGC CGAACGCGAG 
GGCCTCACCC CCGACGCCGC CCTCACCAGG GCCACCCTCG TCACCGCCAC CATGCGAGGC 
CTGCTCCTCC AAGAGGTCCT GACCCCTGGC TCGTGCCCGC AGAACGCCGT CGACCTGATC 
CTGAACAACC CGCCGCACCC TCACCCGCCG CACCCTCACC CGGCCACCGG CGCCAGGTAG
 
Protein sequence
MALSSTPSTP SGTPSGTSTT ASSTPTTGDA RERLLTRLLD VFDDGLPPPE TSLREIATRT 
GTSHALLRYH FGSLAGVLAA VLGAQRTRDN KTLVKTADQA TFADLAHAIW QVYTRPDQLS 
RIRGFFHVVG LAAYRPDDFR EFISSLDDLT KLLASLAERE GLTPDAALTR ATLVTATMRG 
LLLQEVLTPG SCPQNAVDLI LNNPPHPHPP HPHPATGAR