Gene Amir_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3853 
Symbol 
ID8328045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4518615 
End bp4518953 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content73% 
IMG OID644944340 
Productanti-sigma-factor antagonist 
Protein accessionYP_003101578 
Protein GI256377918 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.671125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACC TGACGATCAC CAGGACGACC ACCGCGACCA GGCACGTGGT GACCGCGACC 
GGGGAGCTGG ACCACCGCAG CGCGTCGCGG CTGCGGGAGG CGATCGCCGG GGTGCCGCTG
GGGAGCGGGC ACCACCTGGT GCTGGACCTG AGCTCGCTGG CGTTCTGCGA CTCCAGCGGG
CTGACCGTGT TCATCGGGGC GCACGAGCGG GCGGAGGCGG AGCAGGCGGC GTTCAGCCTG
GTCGGGCCGC CGCCGCCGGT GCACAAGATG CTGCGGCTGA CCGGGCTGGA CACGGTGCTG
ACCGTGCTGA GCAAACCGGC GGGGCTGCTG CACCCGTGA
 
Protein sequence
MSDLTITRTT TATRHVVTAT GELDHRSASR LREAIAGVPL GSGHHLVLDL SSLAFCDSSG 
LTVFIGAHER AEAEQAAFSL VGPPPPVHKM LRLTGLDTVL TVLSKPAGLL HP