Gene Amir_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3846 
Symbol 
ID8328038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp4510239 
End bp4510859 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content74% 
IMG OID644944333 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101571 
Protein GI256377911 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.213396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGACGC TGCGCGAGCG CAAGAAGCAC CGCACCCGCG AGGCGCTGAT CGCGACCGCG 
CTGGAGATGT TCACCGACCG GGGCTTCGCG GCGACGACCC TGGACGAGCT GTGCGAGCGC 
GTCGAGGTGT CCAAGCGGAC GTTCTTCCGG TACTTCGCCA GCAAGGAGGA CGTGGCCACG 
GCGCCCGCCC ACGACATGTG GCGCGCGTTC CTCGACCGCC TGGCGCGGGA CGAGGGGCGC 
GGGAAGGTCG TGGACCTGCT GCAGGAGGCC CTCCTCGCCA CCCTGGAGGA CATGCCGGAC 
GACGGCTGGG CCGACCGGCT CCTGCTGAGC AGGCAGCTGG CCGCCCGCAC CCCGTCGATG 
GACGCGCACG GCCTGTACTT CTGCGACCGC ACGAGCCTGG CCGCGCTGGA GGTCCTGCAC 
GGCCGCACCG GTCTGACCCC GGACGACCTG CGGCTGCGGC TGGCGGTGGA CGTGCTGGTG 
GCGGCGTTCC AGCGGGCGCA GGAGCGCTGG GCGGCGCTGC CGGGGTCGCC GGGCAGGGCG 
GAGCTGGTGG GGTGCGCGCG CGAGGCGTTC GCCGCGGTGC CCGGCATCTT CGCGATCGCC 
GTGGGCGAAA CGGCGGACTA G
 
Protein sequence
METLRERKKH RTREALIATA LEMFTDRGFA ATTLDELCER VEVSKRTFFR YFASKEDVAT 
APAHDMWRAF LDRLARDEGR GKVVDLLQEA LLATLEDMPD DGWADRLLLS RQLAARTPSM 
DAHGLYFCDR TSLAALEVLH GRTGLTPDDL RLRLAVDVLV AAFQRAQERW AALPGSPGRA 
ELVGCAREAF AAVPGIFAIA VGETAD