Gene Amir_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3833 
Symbol 
ID8328025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4497350 
End bp4497991 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content76% 
IMG OID644944320 
ProductMethyltransferase type 11 
Protein accessionYP_003101558 
Protein GI256377898 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGG CAACACACGC GCTCACGGCG GGCGAGGTCG CCGCCGAGTG GGAGCGCAGG 
GCCGCCCGCG ACGGGCTGGC CCGCGTGATG CGCGCCTCCC AGCCCACCGC GCTCGCCGAG 
TCCACCACCG CGCGCACCCG AGAGCTCGTC GCCGGGCACC TGGACCGGCT CGCCCCGGTC 
GGCTCCGCGC TGGAGATCGG CTGCGGCATG GGCAGGCTGA CCCCGACCAT CGCCGCGCGC 
GCCTCCCGCG TGCTGGCGCT GGACATGACC GGGCCGATGC TGGACCTGGC GCGCGCCGCG 
TGCGCCGGGC TGTCCACGGT GGACTTCCAC CGCGCGCCGG TGCAGGAGAT GCCGGTGCCG 
CGGCGGAAGT TCGACGTCGC GGTGTGCGTG TGGGTGCTCA TGCACGTGCT GGACGAGGAC 
GAGCTGGCCG AGGCGTGCCG CCGGATCGCC GCCTCCGCCC GCCACCTGGT GCTGGTCGAG 
TACGAGCGGG CGCACGTCCC GGTCGGCCGC TACTCGCGGC TGCGCGGCCT CGCCGACTAC 
CTGGAGCTGC TGCCCGGCGC GCGGCTGGTG GAGCGGCGCG AGCTGGACTA CGGCGGCGAC 
CTGTCGTTCG CGGCCCTGAT CGAGCTGGGG GAGCGGGCGT GA
 
Protein sequence
MQQATHALTA GEVAAEWERR AARDGLARVM RASQPTALAE STTARTRELV AGHLDRLAPV 
GSALEIGCGM GRLTPTIAAR ASRVLALDMT GPMLDLARAA CAGLSTVDFH RAPVQEMPVP 
RRKFDVAVCV WVLMHVLDED ELAEACRRIA ASARHLVLVE YERAHVPVGR YSRLRGLADY 
LELLPGARLV ERRELDYGGD LSFAALIELG ERA