| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3827 |
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| Symbol | |
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| ID | 8328019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4489479 |
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| End bp | 4490966 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644944314 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003101552 |
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| Protein GI | 256377892 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0189445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCTGGG TTTCCGACAC CGGGCTGGCG GTGGTGGACC TGGTGCCCGC GCGGCTGCGC
GCCGAGTGGG TGCGGCTGGG GCACTGCCCG GACCGGGACC TCGGGGCGTT GCTGCGCGAG
CGGGTGGCCG AGCACCCCGG CCGGGTCGCG GTCGTGGACG AGTCCGGGGA GCTGGACTAC
GCGGGGCTGG ACCGGCGGGT GCGGGCGCTC GCGGGTTCCT TGCAGGAGCG CGGGATCGGG
CCCCGGTCGG TGGTCGGGGT GCGGCTGCCC AACGGGATCG GCGCGGTCGT CGCGGAGCTG
GCGGTGTCGG CGGTCGGCGC GGTCGTGCTG CCGCTGGCCG GGTCCGACGC CGAGATCGCC
GCGCTCGCGG CCCGTGCCCG CGCCGCGCTG GTGCTGACCG GGGGGCTGCC CGGTGGCGGC
GGCTTCCGAC CGGTGGAGGT CGACCCGGAG GCGCCCGCGC GGGTGCTGGT GTCGTCCGGG
TCCGAGGGCG AGCCGAAGCT GGTCGCCTAC TCGCACAACG CGTTCGCGGG CGGTCGGGCG
AACTACCTGC GCGCCGTGCA CGGCGGCGTC CCCGAGGGCG CGCGGGACCT GGTGCTGGTG
CCGCTGTCGT CGGCGTTCGG GTCGTTCGGG GCGGCGATCA CGTTGTGCCG GTTCGGCGGG
ACGCTGGTGC TGCGCCGCCG GTTCGACGCT CGGGAGGCGT TGGAGGCGAT CGCGCGGCAC
CGCCCGGACC ACGTGTTCGG CGTGCCGACG ATGCTGCGCC GCATGGCCGA CCTGGCGGCT
TCCTCCTCCG CCGCGGGCCA CTTCTCGTCG GTGCGGGCGT TCGTGTCCAG CGGCGACGCG
CTGCCGCCGT CGGTGCTGGC GCGGTGCCGC GAGGTGTTCG GGGCGGACGT GGTGTCCGTG
TACGGCTCGT CGGACGGGGT CAACTGCCAC ACCCGCACCC CGGAGCACGG GGTGGGCCGT
CCCGACCCGG CGGTGACCGA CGTCCGGGTG GTGGACGGCG AGATCCGGGC GCTGGGGCCG
ATGACGCCGC TGAGCTACGT GGGCGCGCCG GAGCTGGACG CCCGCTACCG GACCGGGGGC
GGGTGGGTGC GCACCGGCGA CCTGGGGCGG TTCGACGCGG ACGGGGTGCT GCACGTGGTG
GGGCGCGGCA AGCGGGTGGT GCTGCGCGGC GGGTACACGA TCAGCCCGGC GGAGGTGGAG
CGCGAGCTGG GGGCGCACCC GGCGCTCGGG GACGTGGTGT GCGTGCCGGT GCCCGACGAG
GACCTCGGGC AGCGGTTGTG CGCGTGCGTG ACCGCGCGGC CCGGCGCGCC CGTGCCGGGG
CTGGGGGAGC TGACCCGGTA CCTGGTGGCG GAGCGCGGGG TGTCGGTGCG GAAGCTGCCG
GAGTTCCTGC TGGTCCTGGA CGAGCTGCCG GTGGCGCGCA CCGGGAAGGT CTGCCTGCGC
ACGCTGGCGG CCGTGGCGGG GCGTCACCAC GAGAGGGAGA GGGCATGA
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| Protein sequence | MTWVSDTGLA VVDLVPARLR AEWVRLGHCP DRDLGALLRE RVAEHPGRVA VVDESGELDY
AGLDRRVRAL AGSLQERGIG PRSVVGVRLP NGIGAVVAEL AVSAVGAVVL PLAGSDAEIA
ALAARARAAL VLTGGLPGGG GFRPVEVDPE APARVLVSSG SEGEPKLVAY SHNAFAGGRA
NYLRAVHGGV PEGARDLVLV PLSSAFGSFG AAITLCRFGG TLVLRRRFDA REALEAIARH
RPDHVFGVPT MLRRMADLAA SSSAAGHFSS VRAFVSSGDA LPPSVLARCR EVFGADVVSV
YGSSDGVNCH TRTPEHGVGR PDPAVTDVRV VDGEIRALGP MTPLSYVGAP ELDARYRTGG
GWVRTGDLGR FDADGVLHVV GRGKRVVLRG GYTISPAEVE RELGAHPALG DVVCVPVPDE
DLGQRLCACV TARPGAPVPG LGELTRYLVA ERGVSVRKLP EFLLVLDELP VARTGKVCLR
TLAAVAGRHH ERERA
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