Gene Amir_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3804 
Symbol 
ID8327996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp4464116 
End bp4464541 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content73% 
IMG OID644944291 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_003101529 
Protein GI256377869 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.602111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCTCA GCAAGGCCAC CGACATCGCC CTGCGCGTGC TGATGCTCGC TGCGGCCAAG 
GACGCCCAGC TCACCGTGGA CGACCTCGCG ACGAGCATGA ACGTGCCGCG CAACCACGTG 
GCCAAGGTGG TCCAGCGCCT CCAGAAGGAA GGCCTGGTCA CCACGGCGCG GGGGCGCAAC 
GGCGGGGTCT CGGTCCCGCC GGGCGCGAGG GGGGTGTCGG CCGGTCACGT GGTGCGCCGG 
TTCGAGGGCG AGGACGAGGT CGTGGACTGC GAGCAGGGAC CCTGCCCGCT GCACCGCGCG 
TGCCTGCTGC GCGGCGCGCT GCGCACGGCC CGCGAGGCGT TCTTCGCCTC GCTGGACACC 
GTGCTGCTGC GCGACCTGAT CGCCCCGCCC ACGGGCCCGG TCCTGCTGTC GCTGACGAGG 
GAATGA
 
Protein sequence
MHLSKATDIA LRVLMLAAAK DAQLTVDDLA TSMNVPRNHV AKVVQRLQKE GLVTTARGRN 
GGVSVPPGAR GVSAGHVVRR FEGEDEVVDC EQGPCPLHRA CLLRGALRTA REAFFASLDT 
VLLRDLIAPP TGPVLLSLTR E