Gene Amir_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3799 
Symbol 
ID8327991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4459388 
End bp4459819 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content74% 
IMG OID644944287 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003101525 
Protein GI256377865 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.466699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCC GGGAGTGTTC GATCGCCAAC GCGCTCGGGG TGGTCGGCGA GCGGTGGACG 
CTGCTGGCGC TGCGCGAGGT GATGATCGGC TTCCGCCGGT TCGACCAGAT CGTGCGCAAC
ACCGGGGTGA GCCGCGACGT GCTGGCCGCG CGGCTGCGCA AGCTGGTGGC GGCGGGCGTG
CTGGAGCGCA GGCGCTACGA GGACCACCCG CCGCGCTACG AGTACGCCCT GACCGACTCG
GGCCGGGCGC TGCAACCGGT GCTCCAGGCC CTGATGGAGT GGGGCGACCG CTTCGTGACC
CCCGGCCCAC CGCCCGCGGT CTGGCAGCAC CGCTGCGGCC ACGACCTGGA GGTGCGCCCG
GTGTGCTCGC ACTGCGGCGA GGAGGTGGCG TTCACCGGCG TCCGGCCGCG CCGGGTGGGC
GTGGTGCGCT GA
 
Protein sequence
MSSRECSIAN ALGVVGERWT LLALREVMIG FRRFDQIVRN TGVSRDVLAA RLRKLVAAGV 
LERRRYEDHP PRYEYALTDS GRALQPVLQA LMEWGDRFVT PGPPPAVWQH RCGHDLEVRP
VCSHCGEEVA FTGVRPRRVG VVR