| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3789 |
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| Symbol | |
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| ID | 8327981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4448254 |
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| End bp | 4449111 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644944277 |
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| Product | putative hydrolase |
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| Protein accession | YP_003101515 |
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| Protein GI | 256377855 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4257] Streptogramin lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00804259 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTCA CCACCTTCCC GGTGCCCGAC GCGGACGGCC CCTACGGCGT CGCGGTCGGC
CCGGACGGCG CGATCTGGTT CACCGAGGTC GGCGCGGGCA GGCTCGGCCG GATGACCACC
GACGGCGAGC ACACGCCCGT GCCGCTCAAG CTCTCCCCGT GCGCGCCGAC CGTGCTCACC
GCCACCGACG ACGCCCTCTG GTTCACCGAC TTCCGCCACC ACCGCCTCGG CCGCACCACC
CCCGCCGGGC GCACCACCAC CGTGGACCTG CCCGGCGCGG GCCCGTACGG GGTGACCGGC
GGCCCGGACG GCGCGGTGTG GTGCACCGCC GCCACCACCG GCAAGATCGG CCGGATCGAG
GAGGGGCGCG CCACCTGGTT CGACCTGCCC GCGGGCAGCT TCCCCGCGAT GATCACCACC
GGCCCGGACG GGGCGCTGTG GTGCACCCTC AACCAGGCGG GCGCGATCGC CAGGCTGGGC
GTGGACGGCG ACCTGCGCGT CCACCCGCTG CCCACCCCCG GCGCGGGCCC GGTCGGCATC
ACCGCCACCG CCGACGCGCT GTGGTTCACC GAGGTGCTCG CCGGGCGGAT CGGCCGGATC
ACCCCGGACG GCGAGATCAC CGAGTTCGCG CTGCCCGACC CCGAGGCCCG CCCGCACGCC
ATCACCGAGG GCCCGGACGG CGCGCTGTGG TTCACCGAGT GGGCCACCGC CGCCGTCACG
CGCGTGAGCG TGGACGGCGA GCTGACCGGC ACCGCCGCCC TGCCGCCCGG CAGCGAGCCG
CACGGCATCG CGCTCGGCCC GGACGGCGCG CTGTGGACGG CCCTGGAATC CGGGGCCGTC
GCCCGCGTCG AACCCTGA
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| Protein sequence | MRVTTFPVPD ADGPYGVAVG PDGAIWFTEV GAGRLGRMTT DGEHTPVPLK LSPCAPTVLT
ATDDALWFTD FRHHRLGRTT PAGRTTTVDL PGAGPYGVTG GPDGAVWCTA ATTGKIGRIE
EGRATWFDLP AGSFPAMITT GPDGALWCTL NQAGAIARLG VDGDLRVHPL PTPGAGPVGI
TATADALWFT EVLAGRIGRI TPDGEITEFA LPDPEARPHA ITEGPDGALW FTEWATAAVT
RVSVDGELTG TAALPPGSEP HGIALGPDGA LWTALESGAV ARVEP
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