Gene Amir_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3786 
Symbol 
ID8327978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4446474 
End bp4447148 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content76% 
IMG OID644944274 
ProductFR47 domain protein 
Protein accessionYP_003101512 
Protein GI256377852 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00741152 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACCGC TGGACAACCC GTCCTGGTCG GCGCTGAACG GCGCGCAGGC CCGGTTCGCC 
GAGGGCTCCG GGGCGGCGCG GCGCTACCAC CGGGACGTCG CGCCCTTCCA CTCCGTGCCC 
TCCGACCCGG ACGCCGCCGC CTGGCGCGAC CTGGCCCGGT TGACCGGACC CGGCGCGCAG 
GTCGTCCTCA ACACCAACGC CGACCTCCCG GCCGACTGGG AGCTGGTGCA GCACACGCCC 
GCCGTGCAGC TGGTCGACGA CGGCATCACG CCCGCGCCGG ACGCCGAGGC GGTGCGGCTC 
GGCGCGCCCG ACGTGCCGGA GATGCTGGAC CTGGTCGCCC GCACCCAGCC GGGGCCGTTC 
CTGCCGCGCA CCGTGGAGCT GGGCGCCTAC CTGGGCGTGC GGCGCGGCGG GGCGCTGGTC 
GCGATGGCGG GGGAGCGGAT GCGCCCGGAC GGCCACACCG AGATCAGCGC CGTGTGCACC 
GACCCGGCCC ACCGGGGTCA GGGTTTGGCG GCGCGGCTGG TGCTCGCGGT CGCGGTCGGC 
ATCGCGGAGC GCGGCGAGAC GGCGATGATG CACGCCGCGT CCGCGAACAC CGGGGCGATC 
CGGGTCTACG AGAAGCTCGG GTTCGCGGTG CGCCGGGAGA CGAAGTTCAT CGCGGTCCGC 
GCGCCGCTGG CGTGA
 
Protein sequence
MSPLDNPSWS ALNGAQARFA EGSGAARRYH RDVAPFHSVP SDPDAAAWRD LARLTGPGAQ 
VVLNTNADLP ADWELVQHTP AVQLVDDGIT PAPDAEAVRL GAPDVPEMLD LVARTQPGPF 
LPRTVELGAY LGVRRGGALV AMAGERMRPD GHTEISAVCT DPAHRGQGLA ARLVLAVAVG 
IAERGETAMM HAASANTGAI RVYEKLGFAV RRETKFIAVR APLA