| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3771 |
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| Symbol | |
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| ID | 8327963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4436143 |
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| End bp | 4437537 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644944261 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_003101499 |
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| Protein GI | 256377839 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0013231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGATC CCCTGGCCGA GCTGGCCGCG CTGCGCGCCG CCGACCTGCC CACGCACGGC
GGGCGCACCC TGGCCTACGT GTACGACAGC GCGCTGCCGG GGCTGGACGA GTTCGCCGCC
GCCGCGCACG CGCTGGCCGC GCCCGCGAAC GGGCTGGACC CGACCGCGTT CCCGTCGCTG
CTGCGGTTGG AGCGGGAGGT GGTGGCGACG GCGGCGCGGC TGCTGGGCGG CGGGGTCGGG
ACGGTGACGT CGGGCGGGAC CGAGTCGTGC CTGCTGGCGG TGCTGGCGGC GCGCGACTCG
CGGCCGGACG TGGCGCGGCC GTCGGTGGTG GTGCCGGAGA CGGCGCACGC GGCGTTCCAC
AAGGCGGGGC ACTACTTCGG GGTGCGGGTG GTGGCCGTCC CGGTGGACCC GGTGACGTTC
CGGGCCGACC CGGCGGCGAT GGCGGCGGCG GTCGACGCGA CGACGGTGCT GGTGGTGGCG
AGCGCGCCGT CGTACGCGCA CGGGGTGGTG GACCCGGTGG CGGAGATCGC GGCGGTCGCG
GCGGGGCGCG GGGTGCGGTG CCACGTGGAC GCGTGCATCG GCGGGTGGGT GCTGCCGCAC
GCGGACGTGG CGCCGTTCGA CCTCCGGGTG GCGGGGGTGA CGAGCGTGTC GGTGGACCTG
CACAAGTACG CGTACTGCCC GAAGGGGGTG TCGGTGCTGC TGCACGCCGA CGCCGGGTTG
CGGCGGGCGC AGTTCTTCGC GAGCGCGGAC TGGCCCGGTT ACACGATGCT GAACACGACC
ATGCAGTCCA CACGTTCGGG TGGACCTGTG GCGGCGGCGT GGGCGGTGCT GCGGCGGATC
GGTGACGACG GGTACCGGGA GCTGGCGGGG CGGGCGCTGC GGAGCGCCCG GGTGGTGCGG
GAGGGGATCG GCGCGATCGC GGGGCTGCGG GTGCTGGGCG AGCCGGAGGC GACGCTGCTG
GCGGTGGCCG GGGAGGGCGG TGACGGGACG GGCGGGGTGG ACGTGTTCGT GGTGGCGGAC
GAGCTGAAGG CGCGCGGGTG GTACGCGCAG CCGCAGTTCG CGCACGGGGC GTCGCCGGCG
AACCTGCACC TGACGTTGAC GGCGGCGAAC GCGGGGCACG AGGCGGAGCT GCTGGCGGAC
CTGAGCGCGT CGGTGGCGGC GGCTCGGGAG CTGGGGGCGC CGGAGGTGCC GGAGGGGGTG
CTGGCGGCGG TGCGGGGGTT GACGCCCGAC CAGGTGACGG CGGAGGGGGT CGCCGGGTTG
TTGGCGGCGA CCGGGATGGG TGGGGGCGGG GTGCTGCCGG AGCGGATGGC GGGGGTGAAC
ACGCTGCTGG CTGCGGCGGG GCCTCGGGTG CGGGAGCGGT TGCTGGTGGA GTTCCTGGGG
GTGCTGCACT CGTAG
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| Protein sequence | MTDPLAELAA LRAADLPTHG GRTLAYVYDS ALPGLDEFAA AAHALAAPAN GLDPTAFPSL
LRLEREVVAT AARLLGGGVG TVTSGGTESC LLAVLAARDS RPDVARPSVV VPETAHAAFH
KAGHYFGVRV VAVPVDPVTF RADPAAMAAA VDATTVLVVA SAPSYAHGVV DPVAEIAAVA
AGRGVRCHVD ACIGGWVLPH ADVAPFDLRV AGVTSVSVDL HKYAYCPKGV SVLLHADAGL
RRAQFFASAD WPGYTMLNTT MQSTRSGGPV AAAWAVLRRI GDDGYRELAG RALRSARVVR
EGIGAIAGLR VLGEPEATLL AVAGEGGDGT GGVDVFVVAD ELKARGWYAQ PQFAHGASPA
NLHLTLTAAN AGHEAELLAD LSASVAAARE LGAPEVPEGV LAAVRGLTPD QVTAEGVAGL
LAATGMGGGG VLPERMAGVN TLLAAAGPRV RERLLVEFLG VLHS
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